DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment path and SLC38A1

DIOPT Version :9

Sequence 1:NP_001261634.1 Gene:path / 39106 FlyBaseID:FBgn0036007 Length:471 Species:Drosophila melanogaster
Sequence 2:NP_001265319.1 Gene:SLC38A1 / 81539 HGNCID:13447 Length:503 Species:Homo sapiens


Alignment Length:433 Identity:92/433 - (21%)
Similarity:171/433 - (39%) Gaps:71/433 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 QPRKSDTEQALAGNDFDPFALRDNPHPTTDNETLTHLLKASLGTGILGMPFAFMCSGLIMGIFST 95
            :.|:|.|...|.....|.:.    |..|:...::.:|..|.:|:||||:.||...:|:::.:...
Human    48 ESRRSLTNSHLEKKKCDEYI----PGTTSLGMSVFNLSNAIMGSGILGLAFALANTGILLFLVLL 108

  Fly    96 IFTAFICTHCSYVLVKCGHKLYYRTRRTK-MTFAEIAEAAFQKGPKWCRGFAPVAKFSILFGLFL 159
            .....:..:...:|:.|       ::.|. |.:.::.|..          |....||.|.....|
Human   109 TSVTLLSIYSINLLLIC-------SKETGCMVYEKLGEQV----------FGTTGKFVIFGATSL 156

  Fly   160 TYFGTCSVYTVIVASNFEQLISYWTGTA-------VSLRMLICI----MLVPLILIAWVPNLKYL 213
            ...|....|..||.:.....|.:..|..       |..|:|:.|    :::||.|:..:..|.|.
Human   157 QNTGAMLSYLFIVKNELPSAIKFLMGKEETFSAWYVDGRVLVVIVTFGIILPLCLLKNLGYLGYT 221

  Fly   214 APVSMVANVFMGLGLGITFYYLVQDLPPVEERESVVWST-------LPQ---FFSITIFAMEAIG 268
            :..|:...||.   |.:..|...|....|.|..|.:.:.       .|:   |.|.|::|:..|.
Human   222 SGFSLSCMVFF---LIVVIYKKFQIPCIVPELNSTISANSTNADTCTPKYVTFNSKTVYALPTIA 283

  Fly   269 V-------VMPLENNMK-TPQSFLGICGVLSQGMSGVTLIYMLLGFLGYLR-YGSATGESITLNL 324
            .       |:|:.:.:| ..|..:.:...:|  ...:.::|.|....|||. |.:...:.:....
Human   284 FAFVCHPSVLPIYSELKDRSQKKMQMVSNIS--FFAMFVMYFLTAIFGYLTFYDNVQSDLLHKYQ 346

  Fly   325 PIEEWPAQTVKVLISLAVYCTFGLQFFVCLEIIWDGIKEKCKK------RPTLVNYVLRTVLVTA 383
            ..::....||::.:.:||..|..:.||.    :...:.|..||      |.|:|..:|..|:   
Human   347 SKDDILILTVRLAVIVAVILTVPVLFFT----VRSSLFELAKKTKFNLCRHTVVTCILLVVI--- 404

  Fly   384 AVVLAVAVPTIGPFMGLIGAFCFSILGLIFPVVIELIVHWESG 426
             .:|.:.:|::....|::|....::|..|.|..:.|.:..:.|
Human   405 -NLLVIFIPSMKDIFGVVGVTSANMLIFILPSSLYLKITDQDG 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pathNP_001261634.1 SLC5-6-like_sbd 56..456 CDD:294310 86/408 (21%)
SdaC 67..445 CDD:223884 85/397 (21%)
SLC38A1NP_001265319.1 SLC5-6-like_sbd 69..480 CDD:382020 86/408 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54358
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.