DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment path and Slc38a3

DIOPT Version :9

Sequence 1:NP_001261634.1 Gene:path / 39106 FlyBaseID:FBgn0036007 Length:471 Species:Drosophila melanogaster
Sequence 2:NP_001186146.1 Gene:Slc38a3 / 76257 MGIID:1923507 Length:505 Species:Mus musculus


Alignment Length:473 Identity:109/473 - (23%)
Similarity:181/473 - (38%) Gaps:87/473 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVNIVDSGSKHAPQEMEQFLPGEGKVMYKIQPRKSDTEQALAGNDFDPFALRDNPHPTTDNETLT 65
            ||.:|.:| ||    :|..|| .|......| |..||:....|..|...:....|| .||.|..|
Mouse     9 MVELVPNG-KH----LEGLLP-VGVPTTDTQ-RTEDTQHCGEGKGFLQKSPSKEPH-FTDFEGKT 65

  Fly    66 -------HLLKASLGTGILGMPFAFMCSGLIMGIFSTIFTAFICTHCSYVLVKCGHKLYYRTRRT 123
                   :|..|.:|:||||:.:|...:|:|:.:|.....|.:.::..::|:|....:..|    
Mouse    66 SFGMSVFNLSNAIMGSGILGLAYAMANTGIILFLFLLTAVALLSSYSIHLLLKSSGIVGIR---- 126

  Fly   124 KMTFAEIAEAAFQKGPKWCRGFAPVAKFSILFGLFLTYFGTCSVYTVIVAS----------NFEQ 178
                     |..|.|   .|.|....|.:....:.|...|..|.|..|:.|          |.|:
Mouse   127 ---------AYEQLG---YRAFGTPGKLAAALAITLQNIGAMSSYLYIIKSELPLVIQTFLNLEK 179

  Fly   179 LISYWTGTAVSLRMLICI-MLVPLILIAWVPNLKYLAPVSMVANVFMGLGLGITFYYLVQDLPPV 242
            ..|.|......|.:|:.: :::||.|:..:..|.|.:..|:...||.   |....|...|...|:
Mouse   180 PASVWYMDGNYLVILVSVTIILPLALMRQLGYLGYSSGFSLSCMVFF---LIAVIYKKFQVPCPL 241

  Fly   243 -----------------EERESV---------VWSTLPQFFS----------ITIFAMEAIGVVM 271
                             ||:..:         .:.| |.:|:          |..||......|:
Mouse   242 AHNLANATGNFSHMVVAEEKAQLQGEPDTAAEAFCT-PSYFTLNSQTAYTIPIMAFAFVCHPEVL 305

  Fly   272 PLENNMKTPQSFLGICGVLSQGMSGVTLIYMLLGFLGYLR-YGSATGESITLNLPIEEWPA--QT 333
            |:...:|.| |...:..:.:..::.:.::|.|....|||. |.....|.:.....::.:..  ..
Mouse   306 PIYTELKDP-SKRKMQHISNLSIAVMYVMYFLAALFGYLTFYDGVESELLHTYSKVDPFDVLILC 369

  Fly   334 VKVLISLAVYCTFGLQFFVCLEIIWDGIKEKCKKRPTLVNYVLRTVLVTAAVVLAVAVPTIGPFM 398
            |:|.:.:||..|..:..|.....|...:.:. ::...|.:.::.|.|:|...:|.:..|.|....
Mouse   370 VRVAVLIAVTLTVPIVLFPVRRAIQQMLFQN-QEFSWLRHVLIATGLLTCINLLVIFAPNILGIF 433

  Fly   399 GLIGAFCFSILGLIFPVV 416
            |:|||.....|..|||.:
Mouse   434 GIIGATSAPCLIFIFPAI 451

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pathNP_001261634.1 SLC5-6-like_sbd 56..456 CDD:294310 92/418 (22%)
SdaC 67..445 CDD:223884 87/400 (22%)
Slc38a3NP_001186146.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 27..48 5/21 (24%)
Aa_trans 63..492 CDD:279788 88/411 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54358
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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