DRSC/TRiP Functional Genomics Resources

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Protein Alignment path and Slc38a4

DIOPT Version :9

Sequence 1:NP_001261634.1 Gene:path / 39106 FlyBaseID:FBgn0036007 Length:471 Species:Drosophila melanogaster
Sequence 2:NP_001344987.1 Gene:Slc38a4 / 69354 MGIID:1916604 Length:547 Species:Mus musculus


Alignment Length:510 Identity:100/510 - (19%)
Similarity:173/510 - (33%) Gaps:171/510 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 DNPHP--TTDNETLTHLLKASLGTGILGMPFAFMCSGLIMGIFSTIFTAFICTHCSYVLVKC--- 112
            |..||  |:...:..:|..|.:|:||||:.:|...:|:|:.|...:..|.:..:..::|:|.   
Mouse    68 DEHHPGMTSFGMSSFNLSNAIMGSGILGLSYAMANTGIILFIIMLLTVAILSLYSVHLLLKTAKE 132

  Fly   113 GHKLYYRTRRTKMTFAEIAEAAFQKGPKWCRGFAPVAKFSILFGLFLTYFGTCSVYTVIVASNFE 177
            |..|.|.         ::.|.||    .|      ..|......:.:...|..|.|..|:.....
Mouse   133 GGSLIYE---------KLGEKAF----GW------PGKIGAFISITMQNIGAMSSYLFIIKYELP 178

  Fly   178 QLIS------------YWTGTAVSLRMLICIMLVPLILIAWVPNLKYLAPVSMVANVFMGLGLGI 230
            ::|.            |..|..:.|.:.:.|:| ||.|:..:..|.|.:..|:...||.   :.:
Mouse   179 EVIRAFMGLEENTGEWYLNGNYLVLFVSVGIIL-PLSLLKNLGYLGYTSGFSLSCMVFF---VSV 239

  Fly   231 TFYYLVQ---DLPPVEER-----------------------------------------ESVVWS 251
            ..|...|   .||.::..                                         |..|..
Mouse   240 VIYKKFQIPCPLPALDHNNGNLTFNNTLPIHMISLPNDSESSGVNFMMDYAHHNPAGLDEKQVAG 304

  Fly   252 TL----------------PQFF---SITIFAMEAIGV-------VMPLENNMKTPQSFLGICGVL 290
            .|                |::|   |.|.:|:..:..       |:|:.:.:| .:|...:..|.
Mouse   305 PLHSNGVEYEAQGAEKCQPKYFVFNSRTAYAIPILAFAFVCHPEVLPIYSELK-DRSRRKMQTVS 368

  Fly   291 SQGMSGVTLIYMLLGFLGYLR-YGSATGE------------------------SITLNLPIEEWP 330
            :..:||:.::|:|....|||. ||....|                        ::||.:||..:|
Mouse   369 NISISGMLVMYLLAALFGYLSFYGDVEDELLHAYSKVYTFDTALLMVRLAVLVAVTLTVPIVLFP 433

  Fly   331 AQTVKVLISLAVYCTFGLQFFVCLEIIWDGIKEKCKKRPTLVNYVLRTVLVTAAVVLAVAVPTIG 395
            .:|..:.:           .|......|            |.::.:..:::....:|.:.||||.
Mouse   434 IRTSVITL-----------LFPRKPFSW------------LKHFGIAAIIIALNNILVILVPTIK 475

  Fly   396 PFMGLIGAFCFSILGLIFPVVIELIVHWESGFGKYNWILWKNAIITLCGIGALVF 450
            ...|.|||...::|..|.|...            |..::.|..:.:...||||||
Mouse   476 YIFGFIGASSATMLIFILPAAF------------YLKLVKKEPLRSPQKIGALVF 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pathNP_001261634.1 SLC5-6-like_sbd 56..456 CDD:294310 99/507 (20%)
SdaC 67..445 CDD:223884 90/487 (18%)
Slc38a4NP_001344987.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..34
SLC5-6-like_sbd 75..535 CDD:382020 97/503 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54358
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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