DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment path and Slc38a6

DIOPT Version :9

Sequence 1:NP_001261634.1 Gene:path / 39106 FlyBaseID:FBgn0036007 Length:471 Species:Drosophila melanogaster
Sequence 2:NP_001032806.2 Gene:Slc38a6 / 625098 MGIID:3648156 Length:457 Species:Mus musculus


Alignment Length:466 Identity:102/466 - (21%)
Similarity:186/466 - (39%) Gaps:109/466 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 EQALAGNDFDPFALRDNPHPTTDNE-----TLTHLLKASLGTGILGMPFAFMCSGLIMGIFSTIF 97
            |:|:|.:::.|. |.:.||....:.     ::.:::.|.:|:||||:.:....:|::...|..:|
Mouse    22 EEAVAADEWSPL-LSNEPHRQGSSGASFGLSVFNVMNAIMGSGILGLAYVMANTGILGFSFLLLF 85

  Fly    98 TAFICTHCSYVLV-KCGHKLYYRTRRTKMT-FAEIAEAAFQKGPKWCRGFAPVAKFSILFGLFLT 160
            .|.:.::..::|: .|.|        |.:| :.::...||        |..  .|..:...:.:.
Mouse    86 VALLASYSVHLLLAMCIH--------TAVTSYEDLGLFAF--------GLP--GKVVVAGTIIIQ 132

  Fly   161 YFGTCSVYTVIVASNFEQLIS---------YWTGTAVSLRMLICIMLV-PLILIAWVPNLKYLAP 215
            ..|..|.|.:|:.:.....||         .|......|.::||:.:| ||.|:..:..|.|.:.
Mouse   133 NIGAMSSYLLIIKTELPAAISEFLPSDHSGSWYLDGQMLLIIICVGIVFPLSLLPKIGFLGYTSS 197

  Fly   216 VSMVANVFMGLGLGITFYYL-----VQDLPPVEERESVVWSTLPQFFSI---TIFAMEAIGV--- 269
            :|....||..|.:.|..:.:     :..:..|.:..:......|:.|..   :::|:..:..   
Mouse   198 LSFFFMVFFALVVVIKKWAVPCPVTLDCINEVFQISNATDDCKPKLFHFSKESVYAIPTMAFSFL 262

  Fly   270 ----VMPLENNMKTPQSFLGICGVLSQGMSGVT--------LIYMLLGFLGYLR-YGSATGESI- 320
                |:|:...:::|.         .:.|..||        |:|.:....|||. |.....|.: 
Mouse   263 CHTSVLPIYCELQSPS---------KKRMQNVTNTAIALSFLVYFVSALFGYLTFYDKVESELLQ 318

  Fly   321 --TLNLPIEEWPAQTVKVLISLAVYCTFGLQFFVCLEIIWDGIKEKCKKRPTLV---NYV---LR 377
              :..|| .:.....||:.|..||..|..|..|            ..:|...::   ||.   :|
Mouse   319 GYSKYLP-HDVIVMAVKLCILFAVLLTAPLIHF------------PARKALMMILFSNYPFSWIR 370

  Fly   378 TVLVTAA-----VVLAVAVPTIGPFMGLIGAFCFSILGLIFPVVIELIVHWESGFGKYNWILWKN 437
            ..|.|||     ||||:.||.|....|::||...:.|..:||.:..|.:..|      :::.||.
Mouse   371 HSLTTAALNAIIVVLAIYVPDIRNVFGVVGASTSTCLIFVFPGLFYLKLSRE------DFLSWKK 429

  Fly   438 AIITLCGIGAL 448
                   :|||
Mouse   430 -------LGAL 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pathNP_001261634.1 SLC5-6-like_sbd 56..456 CDD:294310 96/448 (21%)
SdaC 67..445 CDD:223884 92/427 (22%)
Slc38a6NP_001032806.2 SdaC 45..452 CDD:223884 95/442 (21%)
SLC5-6-like_sbd 45..452 CDD:294310 95/442 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54358
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.