DRSC/TRiP Functional Genomics Resources

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Protein Alignment path and Slc38a8

DIOPT Version :9

Sequence 1:NP_001261634.1 Gene:path / 39106 FlyBaseID:FBgn0036007 Length:471 Species:Drosophila melanogaster
Sequence 2:XP_006255783.1 Gene:Slc38a8 / 502208 RGDID:1560237 Length:476 Species:Rattus norvegicus


Alignment Length:413 Identity:80/413 - (19%)
Similarity:159/413 - (38%) Gaps:69/413 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 LRDNPHPTTDNETLTH------LLKASLGTGILGMPFAFMCSG-----LIMGIFSTIFTAFICTH 104
            |.:.|.|.|.:..|:.      |||::||.|:|..|:||..:|     .::.:.|.:|.......
  Rat    11 LPEKPLPATTHPPLSSLGAVFILLKSALGAGLLNFPWAFYKAGGLVPTFLVALVSLVFLISGLVI 75

  Fly   105 CSYVLVKCGHKLYYRTRRTKMTFAEIAEAAFQKGPKWCRGFAPVAKFSILFGLFLTYFGTCSV-Y 168
            ..|.....|...|....|      |:...|..|..:.|               |||.....|| :
  Rat    76 LGYAASVSGQTTYQGVVR------ELCGPAMGKLCEAC---------------FLTNLLMISVAF 119

  Fly   169 TVIVASNFEQLIS---------YWTGTAVSLRMLICIMLVPLILIAWVPNLKYLAPVSMVANVFM 224
            ..::....|:|..         ::...:.:|.::..:::.||..:..:...:|.:.:..:|..::
  Rat   120 LRVIGDQLEKLCDSLLPDAPQPWYAAQSFTLPLISVLVIFPLSALRDIALQEYTSILGTLAACYL 184

  Fly   225 GLGLGITFYYLVQDL--PPVEERESVVWSTLPQFFSITIFAME----AIGVVMPLENNMKTPQSF 283
            .|.:.:.:|...|.|  .|........|:::...|....|..:    |:.:...::|......:.
  Rat   185 ALVITVQYYLWPQGLIRQPGPLLSPSPWTSVFSVFPTICFGFQCHEAAVSIYCSMQNQSLPHWTL 249

  Fly   284 LGICGVLSQGMSGVTLIYMLLGFLGYLRYGSATGESITLNLPIEEWPAQTVKVLISLAVYCTFGL 348
            :.:..:::     ..|:|.|.|..|:|.:|:.....|.::.|..:......:||.::::...:.:
  Rat   250 VSVLSLMA-----CCLVYTLTGVYGFLTFGTEVSADILMSYPGNDTAIIVARVLFAVSIVTVYPI 309

  Fly   349 QFFVCLEIIWDGIKEK---CKKRPTL-------VNYVLRTVLVTAAVVLAVAVPTIGPFMGLIGA 403
            ..|:...::.|..|:.   .:..|.|       |...|..:.|...:.:|:.:|.:...:|:||.
  Rat   310 VLFLGRSVMQDFWKKSYWATQGSPVLADPSGPWVRLPLTFLWVAVTLAMALFLPDLSEIIGVIGG 374

  Fly   404 ------FCFSILGLIFPVVIELI 420
                  |.|..|.||..|..|.|
  Rat   375 LSAFFIFIFPGLCLISAVDTEPI 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pathNP_001261634.1 SLC5-6-like_sbd 56..456 CDD:294310 78/408 (19%)
SdaC 67..445 CDD:223884 75/391 (19%)
Slc38a8XP_006255783.1 SLC5-6-like_sbd 29..386 CDD:294310 69/382 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54358
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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