DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment path and Slc38a8

DIOPT Version :10

Sequence 1:NP_648327.1 Gene:path / 39106 FlyBaseID:FBgn0036007 Length:471 Species:Drosophila melanogaster
Sequence 2:NP_001178938.1 Gene:Slc38a8 / 502208 RGDID:1560237 Length:432 Species:Rattus norvegicus


Alignment Length:451 Identity:89/451 - (19%)
Similarity:169/451 - (37%) Gaps:82/451 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 LRDNPHPTTDNETLTH------LLKASLGTGILGMPFAFMCSG-----LIMGIFSTIFTAFICTH 104
            |.:.|.|.|.:..|:.      |||::||.|:|..|:||..:|     .::.:.|.:|.......
  Rat    11 LPEKPLPATTHPPLSSLGAVFILLKSALGAGLLNFPWAFYKAGGLVPTFLVALVSLVFLISGLVI 75

  Fly   105 CSYVLVKCGHKLYYRTRRTKMTFAEIAEAAFQKGPKWCRGFAPVAKFSILFGLFLTYFGTCSV-Y 168
            ..|.....|...|....|      |:...|..|..:.|               |||.....|| :
  Rat    76 LGYAASVSGQTTYQGVVR------ELCGPAMGKLCEAC---------------FLTNLLMISVAF 119

  Fly   169 TVIVASNFEQLIS---------YWTGTAVSLRMLICIMLVPLILIAWVPNLKYLAPVSMVANVFM 224
            ..::....|:|..         ::...:.:|.::..:::.||..:..:...:|.:.:..:|..::
  Rat   120 LRVIGDQLEKLCDSLLPDAPQPWYAAQSFTLPLISVLVIFPLSALRDIALQEYTSILGTLAACYL 184

  Fly   225 GLGLGITFYYLVQDL--PPVEERESVVWSTLPQFFSITIFAME----AIGVVMPLENNMKTPQSF 283
            .|.:.:.:|...|.|  .|........|:::...|....|..:    |:.:...::|......:.
  Rat   185 ALVITVQYYLWPQGLIRQPGPLLSPSPWTSVFSVFPTICFGFQCHEAAVSIYCSMQNQSLPHWTL 249

  Fly   284 LGICGVLSQGMSGVTLIYMLLGFLGYLRYGSATGESITLNLPIEEWPAQTVKVLISLAVYCTFGL 348
            :.:..:::     ..|:|.|.|..|:|.:|:.....|.::.|..:......:||.::::...:.:
  Rat   250 VSVLSLMA-----CCLVYTLTGVYGFLTFGTEVSADILMSYPGNDTAIIVARVLFAVSIVTVYPI 309

  Fly   349 QFFVCLEIIWDGIKEK---CKKRPTL-------VNYVLRTVLVTAAVVLAVAVPTIGPFMGLIGA 403
            ..|:...::.|..|:.   .:..|.|       |...|..:.|...:.:|:.:|.:...:|:||.
  Rat   310 VLFLGRSVMQDFWKKSYWATQGSPVLADPSGPWVRLPLTFLWVAVTLAMALFLPDLSEIIGVIGG 374

  Fly   404 ------FCFSILGLIFPVVIELIVHWESGFG---KYNWILWKNAIITLCGIGALVFGTQAA 455
                  |.|..|.||..|..|.|       |   |.....|....:.|   |..|||...|
  Rat   375 LSAFFIFIFPGLCLISAVDTEPI-------GPRVKCCLEAWGTLSVLL---GTFVFGQSTA 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pathNP_648327.1 SLC5-6-like_sbd 56..456 CDD:444915 87/446 (20%)
Slc38a8NP_001178938.1 SLC5-6-like_sbd 29..386 CDD:444915 69/382 (18%)

Return to query results.
Submit another query.