DRSC/TRiP Functional Genomics Resources

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Protein Alignment path and slc38a6

DIOPT Version :9

Sequence 1:NP_001261634.1 Gene:path / 39106 FlyBaseID:FBgn0036007 Length:471 Species:Drosophila melanogaster
Sequence 2:NP_001008117.2 Gene:slc38a6 / 493479 XenbaseID:XB-GENE-1016511 Length:448 Species:Xenopus tropicalis


Alignment Length:420 Identity:94/420 - (22%)
Similarity:178/420 - (42%) Gaps:67/420 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 DTEQALAGNDFDPFALRDNPHPTTDNET-----LTHLLKASLGTGILGMPFAFMCSGLIMGIFST 95
            |..|..||.|.....|.::|...:...|     :.:|:.|.:|:||||:.:|...:| |:| ||.
 Frog    12 DGHQVSAGRDESTPLLANSPQRRSSGGTSFGFAVFNLMNAIMGSGILGLSYAMAKTG-ILG-FSA 74

  Fly    96 --IFTAFICTHCSYVLVKCGHKLYYRTRRTKMTFAEIAEAAFQKGPKWCRGFAPVAKFSILFGLF 158
              :..|.:..:..::|:    ::...|..|  ::.::...||.:.          .|..:...:.
 Frog    75 LLLIVALLAAYSIHLLL----RMCLLTAVT--SYEDLGLYAFGRS----------GKVLVACTIL 123

  Fly   159 LTYFGTCSVYTVIVASNFEQLIS-----------YWTGTAVSLRMLICIMLVPLILIAWVPNLKY 212
            :...|..|.|..|:.|.....|:           |..|..:.:...:||:| ||.|:..:..|.|
 Frog   124 IQNVGAMSSYLFIIKSELPAAIASFLPGAQGEPWYLDGRTLLIITSVCIVL-PLALLPKIGFLGY 187

  Fly   213 LAPVSMVANVFMGLGLGITFYYLVQDLPPVEERESVVWSTLP----------QFFSITIFAMEAI 267
            .:.:|....|:..:.:.|..:.:...|||:  ..:|.:...|          .|...:.||:..:
 Frog   188 TSSLSFFFMVYFAVVIVIKKWNIPCPLPPL--NHTVTFLQAPNISECKPKLFDFSKESAFALPTM 250

  Fly   268 GV-------VMPLENNMKTPQSFLGICGVLSQGMSGVTLIYMLLGFLGYLR-YGSATGESI---T 321
            ..       |:|:...:|:| |...:..|.:.|::...|||.:....|||. |.:...|.:   :
 Frog   251 AFSFLCHTSVLPIYCELKSP-SKSKMQNVANVGIALSFLIYYISALFGYLTFYDNVKSELLQGYS 314

  Fly   322 LNLPIEEWPAQTVKVLISLAVYCTFGLQFFVCLEIIWDGIKEKCKKRP-TLVNYVLRTVLVTAAV 385
            ..|| ::....||::.|.|||..|..|..|...:.:   :.....:.| :.:.::|.|:::...:
 Frog   315 KYLP-KDVLIITVRLCILLAVLLTVPLIHFPARKAV---MMMFFSRYPFSYIRHILVTLVLNIII 375

  Fly   386 V-LAVAVPTIGPFMGLIGAFCFSILGLIFP 414
            | ||:.||.:....|::|:...:.|..:||
 Frog   376 VLLAIYVPDMRSVFGVVGSTTSTCLLFVFP 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pathNP_001261634.1 SLC5-6-like_sbd 56..456 CDD:294310 87/400 (22%)
SdaC 67..445 CDD:223884 86/384 (22%)
slc38a6NP_001008117.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..36 7/23 (30%)
SLC5-6-like_sbd 37..412 CDD:382020 87/395 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54358
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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