DRSC/TRiP Functional Genomics Resources

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Protein Alignment path and slc38a4

DIOPT Version :9

Sequence 1:NP_001261634.1 Gene:path / 39106 FlyBaseID:FBgn0036007 Length:471 Species:Drosophila melanogaster
Sequence 2:NP_001005944.2 Gene:slc38a4 / 449771 ZFINID:ZDB-GENE-041010-14 Length:538 Species:Danio rerio


Alignment Length:484 Identity:101/484 - (20%)
Similarity:166/484 - (34%) Gaps:182/484 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 HP--TTDNETLTHLLKASLGTGILGMPFAFMCSGLIMGIFSTIFTAFI---CTHCSYVLVKCGHK 115
            ||  .:...::.:|..|.:|:||||:.||...:|:|:.:...:..|.:   ..|...|..|.|..
Zfish    68 HPGHASFGMSVFNLSNAIMGSGILGLSFAMANTGIILFVILLLGVAILSLYSVHLLLVTAKEGGS 132

  Fly   116 LYYRTRRTKMTFAEIAEAAFQKGPKWCRGFAPVAKFSILFGLFLTYFGTCSVYTVIVASNFEQLI 180
            |.|.         ::.|.||    .|      ..|.:....:.|...|..|.|..||.....::|
Zfish   133 LIYE---------KLGERAF----GW------PGKMAAFGSITLQNIGAMSSYLFIVKYELPEVI 178

  Fly   181 S------------YWTGTAVSLRMLICIMLVPLILIAWVPNLKYLAPVSMVANVFMGLGLGITFY 233
            .            |..|..|.:.:.|.|:| ||.|:..:..|.|.:..|:...||.   ||:..|
Zfish   179 RAFLGLEESSGEWYLNGNYVVVLVSIGIIL-PLSLLKNLGYLGYTSGFSLSCMVFF---LGVLIY 239

  Fly   234 YLVQDLPPVEERESVVWSTLPQFF----SITIFAMEAIGVV----------------------MP 272
                       :::::...||.||    :::|...:||.:.                      .|
Zfish   240 -----------KKTILPCPLPFFFEHGSNVSINGSDAIALYGLHNASALAYMSETAANAVDPHTP 293

  Fly   273 LEN------------NMKTPQ---------------SFLGIC--GVL-------------SQGMS 295
            |.:            :|.||:               :|..:|  .||             .|.:|
Zfish   294 LHDSVQFSAHPEDHQDMCTPKYFIFNSQTVYTVPILAFAFVCHPEVLPIYSELKNRSRRRMQSVS 358

  Fly   296 GVTLIYMLLGFL-----GYLR-YGSATGE------------------------SITLNLPIEEWP 330
            .::::.||:.:|     |||. |.....|                        ::||.:||..:|
Zfish   359 NLSILAMLVMYLLSALFGYLTFYDHVEAELLHTFTKVYKFDTMLLMVRLAVLTAVTLTVPIVLFP 423

  Fly   331 AQTVKVLISLAVYCTFGLQFFVCLEIIWDGIKEKCKKRPTLVNYVLRTVLVTAAV-----VLAVA 390
            .::     |:...|..|.:|      .|                 :|..|:.||:     :|.:.
Zfish   424 IRS-----SVITLCFAGKEF------SW-----------------IRHFLIAAAILAFNNLLVIF 460

  Fly   391 VPTIGPFMGLIGAFCFSILGLIFPVVIEL 419
            ||||....|.||:...::|..|.|....|
Zfish   461 VPTIRDIFGFIGSSAATMLIFILPAAFYL 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pathNP_001261634.1 SLC5-6-like_sbd 56..456 CDD:294310 101/484 (21%)
SdaC 67..445 CDD:223884 99/471 (21%)
slc38a4NP_001005944.2 DUF4404 3..90 CDD:291055 5/21 (24%)
SdaC 68..520 CDD:223884 101/484 (21%)
SLC5-6-like_sbd 72..525 CDD:294310 99/480 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54358
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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