DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment path and slc38a5b

DIOPT Version :9

Sequence 1:NP_001261634.1 Gene:path / 39106 FlyBaseID:FBgn0036007 Length:471 Species:Drosophila melanogaster
Sequence 2:NP_001002648.1 Gene:slc38a5b / 436921 ZFINID:ZDB-GENE-040718-395 Length:472 Species:Danio rerio


Alignment Length:497 Identity:100/497 - (20%)
Similarity:189/497 - (38%) Gaps:115/497 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 QEMEQFLPGEGKVMYKIQPRKSDTEQALAGNDFDPFALRDNPHPTTDNETLTHLLKASLGTGILG 78
            ||.:|...||.....:..|.|||..:.....||:        ..|:...::.:|..|.:|:||||
Zfish    12 QEFQQLEEGEPTEREEFLPHKSDGGKTPQFTDFE--------GKTSFGMSVFNLSNAIMGSGILG 68

  Fly    79 MPFAFMCSGLIMGIFSTIFTAFICTHCSYVLVKCGHKLYYRTRRTKMTFAEIAEAAFQKGPKWCR 143
            :.:|...:|:::.:......|.:.::..::|::....:..|      .:.::.:.||....|   
Zfish    69 LSYAMSNTGIVLFLVLLTCIAVLSSYSVHLLLRSAGVVGIR------AYEQLGKRAFGHPGK--- 124

  Fly   144 GFAPVAKFSILFGLFLTY--FGTCSVYTVIVASNFEQLISYWTGTAVS----------LRMLICI 196
                     ||..:.:|.  .|..|.|..||......:|..:.|...|          |.:::.|
Zfish   125 ---------ILAAVVITMHNIGAMSSYLFIVKYELPLVIQAFLGLQHSSGEWFLNGNYLIIIVSI 180

  Fly   197 -MLVPLILIAWVPNLKYLAPVSMVANVFMGLGL------------GITFYYLVQDLPPVEERESV 248
             :::||.|:..:..|.|.:..|:...||..:.:            ..:.:.:|.::..:|.....
Zfish   181 SIILPLALMRQLGYLGYTSGFSLTCMVFFLISVIYKKFNIPCPFEDFSNHTVVSNISIIEGECEA 245

  Fly   249 VWSTLPQFFSITI----FAMEAIGVVMPLENNMKTP--QSFLGICGVLSQGMSGVTLIYMLLGFL 307
            .:.|:.|..:.|:    ||......|:|:...::.|  :....|..|   .:.|:.::|:|....
Zfish   246 KFFTINQQTAYTVPILAFAFVCHPEVLPIYTELRNPTKRRMQAIANV---SILGMFVMYLLTAIF 307

  Fly   308 GYLRYGSATGESITLNLPIEEWPAQT----VKVLISLAVYCTFGLQFF----VCLEIIWDGIKEK 364
            |||.:...| |:..|:...:..|..|    |:|.:.:||..|..:..|    ..|::::   .||
Zfish   308 GYLTFYLNT-EAELLHTYSKVDPLDTLILCVRVAVLVAVTLTVPVVLFPIRRALLQLLF---PEK 368

  Fly   365 CKKRPTLVNYVLRTVLVTAAVVLAVAVPTIGPFMGLIG--------------------------- 402
            .......::..|  .|:....:|.:.||.|....|:||                           
Zfish   369 PFHWARHISIAL--CLLFVVNLLVIFVPNIRDIFGIIGATSAPSLIFILPGLFYIRIVSPEQEPM 431

  Fly   403 -------AFCFSILGLIFPVVIELIVHWESGFGKYNWILWKN 437
                   |.||:.||.|| :.:.|.      |...:|:..:|
Zfish   432 NSRPKILAACFTALGFIF-MTMSLT------FITLDWVYGEN 466

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pathNP_001261634.1 SLC5-6-like_sbd 56..456 CDD:294310 89/455 (20%)
SdaC 67..445 CDD:223884 88/444 (20%)
slc38a5bNP_001002648.1 SLC5-6-like_sbd 46..457 CDD:294310 86/444 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54358
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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