DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment path and mah

DIOPT Version :9

Sequence 1:NP_001261634.1 Gene:path / 39106 FlyBaseID:FBgn0036007 Length:471 Species:Drosophila melanogaster
Sequence 2:NP_651316.1 Gene:mah / 42988 FlyBaseID:FBgn0285912 Length:527 Species:Drosophila melanogaster


Alignment Length:554 Identity:101/554 - (18%)
Similarity:201/554 - (36%) Gaps:180/554 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 PRKSDTEQALAGNDFD--PFALRDN----PH---PTTDNETLTHLLKASLGTGILGM-PFAFMCS 86
            |::....|....:..|  ||..|..    ||   ...:.|.|:..:.......:.|: ||..:.:
  Fly    24 PKRRPPVQLTPSHQHDQLPFLRRSRFSALPHFRAYEDEPENLSLFIAILYVVDLFGIFPFVTLPA 88

  Fly    87 GLI-MGIFS----------TIFTAFICTHCSYVLVKCGHKLYYRTRRTKMTFAEIAEAAFQKGPK 140
            .|: :|.|.          .|:|:|:.:.|                   .|.||:.:.:.|:.  
  Fly    89 LLVKLGYFGILLVLSIIILQIYTSFLLSQC-------------------WTMAELLDPSIQQK-- 132

  Fly   141 WCRGFAPVAKFSILFG----------LFLTYFGTCSVYTVIVASNFEQLI------------SYW 183
              |.:...|...:.:|          |.|:.|.......|:.|.|.|.::            .||
  Fly   133 --RNYPYAALAELAYGPYMSLLVSVLLDLSIFAMAVPSVVMAAQNLEGVVLRMSAGQYNFSYCYW 195

  Fly   184 TGTAVSLRMLICIMLVPLILIAWVPNLKYLAPVSMVA-------------NVFMGLGLGITFYYL 235
               |:.:.::||    ||:   |:.:.|::..::::|             .:|....:|..|..:
  Fly   196 ---AIIVGLVIC----PLM---WLGSPKHMRGLAIIAVCVMIVIVALLWFCLFAAPAIGTPFEGI 250

  Fly   236 VQDLPPVEERESVVWSTLPQFFSITIFAMEAIGVVMPLENNM--KTPQSFLGICGVLSQGMSGVT 298
            ..:||.        :.|:...:||..|..:...|::.|:.:|  |:..|:..:.|:      .:|
  Fly   251 SLELPG--------FLTVLNSYSILAFQFDIHPVLLTLQIDMKQKSQVSWAALIGI------AIT 301

  Fly   299 LIYMLLG-FLGYLRYGSATGESITLNLPIEEWPAQTVKVLISLAVYCTFGL-----QFFVCLEII 357
            ....:.| .:...::||...:::..:||..   .....:||.:|:...|.:     ..|:.:|..
  Fly   302 CSVAIFGSIIAAYKFGSMIADNLLQSLPTS---VPFYVMLILMALQLCFSVTVASSAMFMQIENY 363

  Fly   358 WDGIKEKCKKRPTLVNY---VLRTVLVTAAVVLAVAVPTIGPFMGLIGAFCFSILG-LIF---PV 415
            :        |.|..:::   ::|:.::...|::|..||:....|.::|.   :|.| |:|   |:
  Fly   364 F--------KLPESLSFKRMLIRSSVLALEVLVAEFVPSFDALMDVVGG---TITGPLVFILPPL 417

  Fly   416 VIELI-----VHW----ESGFG------KYN---------------------WILWKNAIITL-- 442
            :...|     ||.    |:.:|      .|:                     |:.:...:..|  
  Fly   418 LYRRIRRMERVHQRIAAEASYGSLPLDLNYDPVDLEMEPLLVISPPTTPRGCWLRFVRLLHRLEC 482

  Fly   443 ---CGIGALVFG-------TQAAIKDIVKAYSNN 466
               |.:..|:||       |...|..:...::||
  Fly   483 DVSCTMAVLIFGLLATFLSTYLNIFSLASLFTNN 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pathNP_001261634.1 SLC5-6-like_sbd 56..456 CDD:294310 91/512 (18%)
SdaC 67..445 CDD:223884 84/480 (18%)
mahNP_651316.1 SLC5-6-like_sbd 110..426 CDD:294310 69/376 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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