DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment path and CG7888

DIOPT Version :9

Sequence 1:NP_001261634.1 Gene:path / 39106 FlyBaseID:FBgn0036007 Length:471 Species:Drosophila melanogaster
Sequence 2:NP_648425.1 Gene:CG7888 / 39232 FlyBaseID:FBgn0036116 Length:465 Species:Drosophila melanogaster


Alignment Length:426 Identity:183/426 - (42%)
Similarity:253/426 - (59%) Gaps:7/426 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 DFDPFALRDNPHPTTDNETLTHLLKASLGTGILGMPFAFMCSGLIMGIFSTIFTAFICTHCSYVL 109
            |::|:..||..||||::|||.||||.|||||||.||.||..||.|.|...||...||||.|.:.|
  Fly    40 DYNPYHHRDVEHPTTNSETLFHLLKGSLGTGILAMPNAFRNSGYITGSIGTIVIGFICTFCIHQL 104

  Fly   110 VKCGHKLYYRTRRTKMTFAEIAEAAFQKGPKWCRGFAPVAKFSILFGLFLTYFGTCSVYTVIVAS 174
            ||..::|..|.:...|.:..:||.|..:|||..|.|||.....:...|.:...|||.||.|.|||
  Fly   105 VKAQYELCRRKKMPSMNYPMVAETAMGEGPKCFRVFAPYIGTVVNTFLLIYQLGTCCVYVVFVAS 169

  Fly   175 NFEQLISYWTGTAVSLRMLICIMLVPLILIAWVPNLKYLAPVSMVANVFMGLGLGITFYYLVQDL 239
            |.:.::.....|::.:|:.:.|:|:|||||.||.|||||||.|.:||....:..||..||:.::.
  Fly   170 NIKAIVDAVADTSIDVRLCMIIILLPLILINWVRNLKYLAPFSTLANAITMVSFGIICYYIFREP 234

  Fly   240 PPVEERESV-VWSTLPQFFSITIFAMEAIGVVMPLENNMKTPQSFLGICGVLSQGMSGVTLIYML 303
            ...|.:::. ..|..|.||...:||:|||||::||||.|||||.|.|.||||:..|..:..:|:.
  Fly   235 VTTEGKDAFGKPSNFPLFFGTVLFALEAIGVILPLENEMKTPQKFGGSCGVLNVSMVLIVFLYVG 299

  Fly   304 LGFLGYLRYGSATGESITLNLPIEEWPAQTVKVLISLAVYCTFGLQFFVCLEIIWDGIKEK---C 365
            :|..|||.||||...|||||:|..|..:..||.:::.|:|.|.||..:|.::|.|:....|   .
  Fly   300 MGLFGYLNYGSAVLGSITLNMPEHEVLSMCVKGMLAFAIYITHGLACYVAIDITWNDYVAKRLGA 364

  Fly   366 KKRPTLVNYVLRTVLVTAAVVLAVAVPTIGPFMGLIGAFCFSILGLIFPVVIELIVHW--ESGFG 428
            ::......|.:||.||....:||||:|.:..|:.|.||.|.|.|||.||.:|::..||  ..||.
  Fly   365 QRNALFWEYAVRTGLVLITFLLAVAIPNLELFISLFGALCLSALGLAFPALIQICTHWYNTKGFA 429

  Fly   429 KYNWILWKNAIITLCGIGALVFGTQAAIKDIVKAYS 464
            |. |::..|.::.:.||..||.||..::|:||..:|
  Fly   430 KV-WLVLSNFVLIIVGILGLVIGTYTSLKEIVLTFS 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pathNP_001261634.1 SLC5-6-like_sbd 56..456 CDD:294310 175/405 (43%)
SdaC 67..445 CDD:223884 161/383 (42%)
CG7888NP_648425.1 SLC5-6-like_sbd 51..453 CDD:294310 174/402 (43%)
SdaC 62..456 CDD:223884 167/394 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 157 1.000 Domainoid score I1306
eggNOG 1 0.900 - - E1_COG0814
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 161 1.000 Inparanoid score I1622
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D284074at33208
OrthoFinder 1 1.000 - - FOG0000138
OrthoInspector 1 1.000 - - mtm1178
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR22950
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X121
98.970

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