DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment path and CG43693

DIOPT Version :9

Sequence 1:NP_001261634.1 Gene:path / 39106 FlyBaseID:FBgn0036007 Length:471 Species:Drosophila melanogaster
Sequence 2:NP_001261694.1 Gene:CG43693 / 39231 FlyBaseID:FBgn0263776 Length:572 Species:Drosophila melanogaster


Alignment Length:446 Identity:194/446 - (43%)
Similarity:274/446 - (61%) Gaps:20/446 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 IQPRKSDTEQALAGNDFDPFALRDNPHPTTDNETLTHLLKASLGTGILGMPFAFMCSGLIMGIFS 94
            |..:|.|..:  .|| ::||..|...|||:|.||..||||.|||:|||.||.||..:||..|:.:
  Fly   135 ISRKKGDDSE--DGN-YNPFEHRKVEHPTSDLETFVHLLKGSLGSGILAMPMAFSHAGLWFGLVA 196

  Fly    95 TIFTAFICTHCSYVLVKCGHKLYYRTRRTKMTFAEIAEAAFQKGP----KWCRGFAPVAKFSILF 155
            |.....:||:|.::||||.|.|..|.:...|.||::||.||..||    :|.|    ..:|.:..
  Fly   197 TFAVGTLCTYCVHILVKCAHILCRRRKIPMMGFADVAEQAFLDGPPALNRWSR----FIRFMVNT 257

  Fly   156 GLFLTYFGTCSVYTVIVASNFEQLISYWTGTAVSLRMLICIMLVPLILIAWVPNLKYLAPVSMVA 220
            .|.:...|.|.:|.|.||:|.||::..:..|.:|:|:.|.|:..|||.:..|.|||:|.|.||:|
  Fly   258 FLVIDLLGCCCIYLVFVATNVEQVVRVYMETELSIRVWIMIVTAPLIFMCLVRNLKFLTPFSMIA 322

  Fly   221 NVFMGLGLGITFYYLVQDLPPVEERESVV----WSTLPQFFSITIFAMEAIGVVMPLENNMKTPQ 281
            |:.|.:|:.|||.|:..|:|...||..:|    |   |.||...|||:|.|||||.|||:||.|.
  Fly   323 NILMFVGIVITFIYMFSDIPAPVERPGIVSVTEW---PLFFGTVIFALEGIGVVMSLENDMKNPS 384

  Fly   282 SFLGICGVLSQGMSGVTLIYMLLGFLGYLRYGSATGESITLNLPIEEWPAQTVKVLISLAVYCTF 346
            .|:|...||:.||..|..:|.|:||.|:|:||..|..|||||||:|:..||:||::|::|::.||
  Fly   385 HFIGCPSVLNFGMGLVIALYTLVGFFGFLKYGPETQASITLNLPLEDKLAQSVKLMIAIAIFFTF 449

  Fly   347 GLQFFVCLEIIWDGIKEKCK-KRPTLVNYVLRTVLVTAAVVLAVAVPTIGPFMGLIGAFCFSILG 410
            .|||:|.:.|:|.|::.|.: ::..:..|.||..||.....:|||:|.:|||:.||||.|.|.||
  Fly   450 TLQFYVPVTILWKGLEHKIRPEKQNISEYGLRVFLVLLCGGIAVALPNLGPFISLIGAVCLSTLG 514

  Fly   411 LIFPVVIELIV-HWESGFGKYNWILWKNAIITLCGIGALVFGTQAAIKDIVKAYSN 465
            :|.|..|||.| |.:.|:|::||.||||:.:.|.|:...|.||..:|.:....:|:
  Fly   515 MIVPATIELAVYHEDPGYGRFNWRLWKNSGLILFGVVGFVAGTYVSIIEFHAEFSS 570

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pathNP_001261634.1 SLC5-6-like_sbd 56..456 CDD:294310 184/409 (45%)
SdaC 67..445 CDD:223884 173/387 (45%)
CG43693NP_001261694.1 SdaC 153..561 CDD:223884 185/414 (45%)
SLC5-6-like_sbd 158..562 CDD:294310 184/410 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 157 1.000 Domainoid score I1306
eggNOG 1 0.900 - - E1_COG0814
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 161 1.000 Inparanoid score I1622
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54358
OrthoDB 1 1.010 - - D284074at33208
OrthoFinder 1 1.000 - - FOG0000138
OrthoInspector 1 1.000 - - mtm1178
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR22950
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X121
109.980

Return to query results.
Submit another query.