DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment path and CG1139

DIOPT Version :9

Sequence 1:NP_001261634.1 Gene:path / 39106 FlyBaseID:FBgn0036007 Length:471 Species:Drosophila melanogaster
Sequence 2:NP_647686.1 Gene:CG1139 / 38264 FlyBaseID:FBgn0035300 Length:451 Species:Drosophila melanogaster


Alignment Length:435 Identity:172/435 - (39%)
Similarity:259/435 - (59%) Gaps:13/435 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 TEQALAGN-DFDPFALRDNPHPTTDNETLTHLLKASLGTGILGMPFAFMCSGLIMGIFSTIFTAF 100
            |:.|...| |:||...|:..:|||:.:|..|.||||:|||:|.||.||..:|.:.|...|:....
  Fly    21 TKSANGSNDDYDPHQHRELKNPTTNFQTFAHFLKASVGTGVLAMPSAFAHAGYVNGTLLTLIIGS 85

  Fly   101 ICTHCSYVLVKCGHKLYYRTRRTKMTFAEIAEAAFQKGPKWCRGFAPVAKFSILFGLFLTYFGTC 165
            :..:|.::|:||.:.|..|.|...::|::......::||.|.|..||:|...:...|...:||.|
  Fly    86 LALYCLHILIKCMYILCKRQRVPYVSFSQAMNLGLKQGPPWLRCLAPIAVPFVDGFLAFYHFGIC 150

  Fly   166 SVYTVIVASNFEQLIS----YWTGTAVSLRMLICIMLVPLILIAWVPNLKYLAPVSMVANVFMGL 226
            .||.|.:|.:.:||:.    .|     .:|:.:||::|||:||..:.|||.|||.|..||:.:.:
  Fly   151 CVYVVFIAESIKQLVDEYLVVW-----DVRIHMCIIIVPLLLIYSIKNLKLLAPFSSAANLLLLV 210

  Fly   227 GLGITFYYLVQDLPPVEERES-VVWSTLPQFFSITIFAMEAIGVVMPLENNMKTPQSFLGICGVL 290
            |.||..||:.::|||:.||:. |....||.||...:||:||:||::.:|.||.||:||:|.||:|
  Fly   211 GFGIILYYIFEELPPLSERDPFVAAGKLPTFFGTVLFALEAVGVILAIEENMATPKSFVGPCGIL 275

  Fly   291 SQGMSGVTLIYMLLGFLGYLRYGSATGESITLNLPIEEWPAQTVKVLISLAVYCTFGLQFFVCLE 355
            :.|||.|..:|:||||.||.:||:.:..|||||:|..|.|||.|||..::..:.::.||.:|...
  Fly   276 NSGMSIVLGLYVLLGFFGYWKYGNESEGSITLNIPQSEIPAQVVKVFFAITTWISYALQGYVTAH 340

  Fly   356 IIWDGIKEKCKK--RPTLVNYVLRTVLVTAAVVLAVAVPTIGPFMGLIGAFCFSILGLIFPVVIE 418
            |:||....|..|  |.|....:.|.::|......|||:|.:..|:.|:|:||.|||||||||:::
  Fly   341 ILWDKYLAKRFKETRQTFYELIFRAIIVLLTFGCAVAIPDLSVFLSLVGSFCLSILGLIFPVLLQ 405

  Fly   419 LIVHWESGFGKYNWILWKNAIITLCGIGALVFGTQAAIKDIVKAY 463
            :.|.:..|:|.:...|..|.::...||...|.||..:|.||:..|
  Fly   406 ICVQYTEGYGPFRIKLIINLLLLCFGIFGGVVGTYVSILDIIAVY 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pathNP_001261634.1 SLC5-6-like_sbd 56..456 CDD:294310 161/406 (40%)
SdaC 67..445 CDD:223884 151/384 (39%)
CG1139NP_647686.1 SdaC 36..404 CDD:223884 152/372 (41%)
SLC5-6-like_sbd 42..444 CDD:294310 161/406 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 157 1.000 Domainoid score I1306
eggNOG 1 0.900 - - E1_COG0814
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 161 1.000 Inparanoid score I1622
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D284074at33208
OrthoFinder 1 1.000 - - FOG0000138
OrthoInspector 1 1.000 - - mtm1178
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR22950
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X121
98.970

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