DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment path and CG30394

DIOPT Version :9

Sequence 1:NP_001261634.1 Gene:path / 39106 FlyBaseID:FBgn0036007 Length:471 Species:Drosophila melanogaster
Sequence 2:NP_611578.1 Gene:CG30394 / 37437 FlyBaseID:FBgn0050394 Length:831 Species:Drosophila melanogaster


Alignment Length:428 Identity:93/428 - (21%)
Similarity:175/428 - (40%) Gaps:62/428 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 LLKASLGTGILGMPFAFMCSGLIMGIFSTIFTAFICTHCSYVLVKCGHKLYYRTRRTKMTFAEIA 131
            |..:.:|.|||.|||.|...|:::.|...:.:..|...|.:.|:|.  .|..|.|..:|.     
  Fly    11 LANSIIGVGILAMPFCFQKCGILLSIVLLVLSNGITRVCCHYLIKT--SLLTRRRSFEML----- 68

  Fly   132 EAAFQKGPKWCRGFAPVAKFSILFGLFLTYFGTCSVYTVIVASNFEQLISYWTGTAVS----LRM 192
                     ....|....|..:...:.....|||..|.|:|.....|:|:......|:    ||.
  Fly    69 ---------GLHAFGTSGKLLVELCIIGYLIGTCITYFVVVGDLGPQIIAKIFALDVADHLHLRS 124

  Fly   193 LICIMLVPLILIAWVPNLKYLAPVSMVANVFMGLGLGITFYYLVQDLPPV---EERESVV-WSTL 253
            |: :::|.::.|..:..|:.:..:|.|....:|..:.:....:::..|.:   :..|.|: |...
  Fly   125 LV-MVVVTVVCIVPLGMLRNVDSLSAVCTASIGFYVCLILKIVLEAQPHITANDWTEKVLYWEPA 188

  Fly   254 PQFFSITIFAMEAIGVVMPL------ENNMKTPQSFLGICGVLSQGMSGVTLIYMLLGFLGYLRY 312
            .....:.||:| |:...|.|      .||    ||...:.|::.......|.:|:.:||.||:.:
  Fly   189 GVLQCLPIFSM-ALSCQMQLFEVFESINN----QSLDKLNGIVRNATWICTFVYISVGFFGYVAF 248

  Fly   313 GSAT-GESITLNLPIEEWPAQTVKVLISLAVYCTFGLQFFVCLEIIWD-----GIKEKCKKRPTL 371
            .:.| ..:|.:||. ..:.:..:|:...|::..:|.|..|.|...::.     |..|.....|..
  Fly   249 CTHTFSGNILVNLS-TSFGSDIIKIGFVLSIAFSFPLVIFPCRASLYSLLYRKGHTESSSYIPEQ 312

  Fly   372 VNYVLRTVLVTAAVVLAVAVPTIGPFMGLIGAFCFSILGLIFPVVIELIVHWESGFGKYNWILWK 436
            ....:...:|..::.:|:.:|::...:||:|:.....:.::||.         |.|.|   |:.|
  Fly   313 RFRFITIFIVVFSLCVALVIPSVELIIGLVGSTIGVAICIMFPA---------SSFRK---IIKK 365

  Fly   437 NAI-------ITLCGIGALVFGTQAAIKDIVKAYSNNE 467
            .::       :.:.|...::.||.|.:..|.:..|..|
  Fly   366 ESMERTLAQFVFVSGFLLMILGTYANLSAIDEKSSGPE 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pathNP_001261634.1 SLC5-6-like_sbd 56..456 CDD:294310 90/415 (22%)
SdaC 67..445 CDD:223884 86/404 (21%)
CG30394NP_611578.1 SdaC 8..392 CDD:223884 90/415 (22%)
SLC5-6-like_sbd 8..390 CDD:294310 89/413 (22%)
DUF4775 <394..652 CDD:292620 3/10 (30%)
YukC <561..660 CDD:295067
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S4715
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR22950
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.860

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