DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment path and CG13743

DIOPT Version :9

Sequence 1:NP_001261634.1 Gene:path / 39106 FlyBaseID:FBgn0036007 Length:471 Species:Drosophila melanogaster
Sequence 2:NP_610444.2 Gene:CG13743 / 35911 FlyBaseID:FBgn0033368 Length:528 Species:Drosophila melanogaster


Alignment Length:539 Identity:111/539 - (20%)
Similarity:197/539 - (36%) Gaps:150/539 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 GSKHAPQEMEQFLPGEGKVMYKIQPRKSDTEQALAGNDFDPFALRDNPHPTTDNETLTHLLKAS- 71
            |....|.:.:|..|.:   ..:.|.|:...:|..|..|   ..|.|         ||:.|.:|| 
  Fly    53 GQPQQPHQQQQQPPQQ---QQQQQHRQHSQQQQQAQQD---AGLGD---------TLSSLPQASF 102

  Fly    72 ------LGTGILGMPFAFMCSGLIMGIFSTIFTAFICTHCSYVLVKCGHKLYYRTRRTKMTFAEI 130
                  :|:|::|:|:|...:|..:|:...|..|:|..:...::|:|||..      .:.::..|
  Fly   103 NYINSIVGSGVIGIPYALHRAGFGLGLALLILVAYITDYSLILMVRCGHIC------GRFSYPGI 161

  Fly   131 AEAAFQKGPKWCRGFAPVAKFSILFGLFLTYFGTCSVYTVIVASNFEQLI----SYWTGTAVSLR 191
            .|||:.|     .|:..::....::. ||....    |.|:|.....:::    ..|.|:..::|
  Fly   162 MEAAYGK-----YGYYLLSLLQFMYP-FLAMIS----YNVVVGDTLSKVLVRFFPSWGGSMGAVR 216

  Fly   192 MLICI-----MLVPLILIAWVPNLKYLAPVSMVANVFMGLGLGITFYYLVQ----DLPPVEERES 247
            :.:..     :::||.|...|..|...:.:|:...||      |.|..:::    |....:..||
  Fly   217 LGVVFFVNVGVVMPLCLYKNVSRLARASFISLACVVF------ILFAVIIKLMSGDYKVTDTAES 275

  Fly   248 VVW----STLPQFFSITIFAMEAIGVVMPLENNMKTPQSFLGICGVLSQGMSGVTL--------- 299
              |    |.|.....|.:||.            |....:||     :.|.|...|:         
  Fly   276 --WRFANSDLIPATGIMVFAF------------MCHHNTFL-----VYQSMRDATMERWEKVTHI 321

  Fly   300 -------IYMLLGFLGYLRYGSATGESITLNLPIEEWPAQTVKVLISLAVYCTFGLQFFVCLEII 357
                   :..|.|..||..:.:.:...:..|...::......:||.|:::..||.::.||..||:
  Fly   322 SIGFAWTVAALFGIAGYSTFRALSQGDLLENYCWDDDLMNFSRVLFSISILLTFPIECFVSREIV 386

  Fly   358 ---------WDGIKEKCK-KRPTL--------VNYVLRTVLVTAAVVLAVAVPTIGPFMGLIGAF 404
                     .:.|.|..: |.|:|        .:..:...:|.:|.|::.....:|..:.|.|..
  Fly   387 RALVHRFVLKEPISEFTQDKDPSLEKGAIIDEYSKAITMAIVFSAFVISPMTDCLGSVLELNGLL 451

  Fly   405 CFSILGLIFP--VVIELIVHWESGFGKYNWILWKNAIIT---LCGIGALVFGTQAAI-------- 456
            ....|..|.|  ..|::..|               |:::   |..:|.:|||....|        
  Fly   452 AAIPLAYILPGLAYIQMEPH---------------ALLSREKLPALGLVVFGALVTILGAAVLLP 501

  Fly   457 --------KDIVKAYSNNE 467
                    .|||..|...|
  Fly   502 GLMGGDCRSDIVMGYCRQE 520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pathNP_001261634.1 SLC5-6-like_sbd 56..456 CDD:294310 94/462 (20%)
SdaC 67..445 CDD:223884 88/440 (20%)
CG13743NP_610444.2 SLC5-6-like_sbd 95..500 CDD:294310 93/460 (20%)
SdaC 95..491 CDD:223884 92/451 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR22950
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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