DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment path and slc38a6

DIOPT Version :9

Sequence 1:NP_001261634.1 Gene:path / 39106 FlyBaseID:FBgn0036007 Length:471 Species:Drosophila melanogaster
Sequence 2:NP_001018308.1 Gene:slc38a6 / 336741 ZFINID:ZDB-GENE-050522-51 Length:449 Species:Danio rerio


Alignment Length:497 Identity:105/497 - (21%)
Similarity:188/497 - (37%) Gaps:129/497 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SGSKHAPQEMEQFLP-GEGKVMYKIQPRKSDTEQALAGNDFDPFALRDNPHPTTDNETLTHLLKA 70
            :|:.|:.|.:.::.| ||.:....:.|:...|.    |:.|...|.              :|:.|
Zfish     4 NGANHSIQTVSEYEPIGEDEERTPLLPQGVQTR----GSSFMSSAF--------------NLMNA 50

  Fly    71 SLGTGILGMPFAFMCSGLIMGIFSTIFTAFICTHCSYVLVKCGHKLYYRTRRTKM-TFAEIAEAA 134
            .:|:||||:.:|...:|.: |.  :|....:.:..:|.:    |.|.....:|.: ::..:.|.|
Zfish    51 IMGSGILGLSYAMANTGTV-GF--SILLLMVASLAAYSI----HLLLLLCDKTGINSYEALGEKA 108

  Fly   135 FQKGPKWCRGFAPVAKFSILFGLFLTYFGTCSVYTVIVASNFEQLI-----------SYWTGTAV 188
            ..:          ..|..:...:.:...|..|.|..|:.:.....|           ..|....|
Zfish   109 LNR----------PGKILVACTILIQNIGAMSSYLFILKTELPAAIIGFMRSDSETSGKWFENGV 163

  Fly   189 SLRMLICIMLV-PLILIAWVPNLKYLAPVSMVANVFMGLGLGITFYYLVQ--DLP---PVEERES 247
            :|.:|:.:::| ||.|:   |.:.:|...|.:|.:||   |..|...:|:  .:|   |:....|
Zfish   164 TLLILVTVIIVLPLALL---PKIGFLGYTSSIAFLFM---LFFTVVVVVKKWSIPCPLPINSTLS 222

  Fly   248 VVWST---LPQFFSIT----------IFAMEAIGVVMPLENNMKTP-----QSFLGICGVLSQGM 294
            :..:|   ..|.|.|:          .|:......|.|:...:..|     |....:...||   
Zfish   223 LSLNTSECTAQLFVISSKSAYAVPTMAFSFLCHTAVFPIYCELHRPTKRRMQRATNVSIFLS--- 284

  Fly   295 SGVTLIYMLLGFLGYLRYGSATGESITL----NLPIEEWPAQTVKVLISLAVYCTFGLQFFVCLE 355
               .::|::....|||.:.|..|..:.|    .|| .:....:|::.|.|||..|..|..|...:
Zfish   285 ---FVVYLISALFGYLTFYSHVGSELLLAYNTYLP-RDILVMSVRLAILLAVLLTVPLIHFPARK 345

  Fly   356 ---IIWDGIKEKCKKRPTLVNYVLRTVLVTAAVVLAVAVPTIGPFMGLIG---AFC--------- 405
               ::..|.:|......||..:    .::|..::||:.||.|....|::|   :.|         
Zfish   346 AVLMLCRGEREFSWLSHTLSCF----FILTLVLLLAIFVPDIKNVFGVVGSTTSTCLLFVYPGMF 406

  Fly   406 -----------FSILGLIFPVVIEL----------IVHWESG 426
                       |:.:|.:|.:||.|          ||.|..|
Zfish   407 FLRISSEPIRSFNSVGAVFLLVIGLVVGVLSLSVIIVSWVQG 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pathNP_001261634.1 SLC5-6-like_sbd 56..456 CDD:294310 94/447 (21%)
SdaC 67..445 CDD:223884 94/436 (22%)
slc38a6NP_001018308.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..25 6/20 (30%)
SLC5-6-like_sbd 36..443 CDD:294310 93/458 (20%)
SdaC 37..442 CDD:223884 93/452 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54358
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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