DRSC/TRiP Functional Genomics Resources

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Protein Alignment path and Slc36a4

DIOPT Version :9

Sequence 1:NP_001261634.1 Gene:path / 39106 FlyBaseID:FBgn0036007 Length:471 Species:Drosophila melanogaster
Sequence 2:NP_001101597.1 Gene:Slc36a4 / 315439 RGDID:1311528 Length:500 Species:Rattus norvegicus


Alignment Length:436 Identity:141/436 - (32%)
Similarity:223/436 - (51%) Gaps:41/436 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 DNPHPTTDNETLTHLLKASLGTGILGMPFAFMCSGLIMGIFSTIFTAFICTHCSYVLVKCGHKLY 117
            |..|..:..:||.||||.::|||:||:|.|...:|:::|..|.:|...|..||.::||:|.|.|.
  Rat    51 DGQHGISFVQTLMHLLKGNIGTGLLGLPLAIKNAGIVLGPISLVFIGIISVHCMHILVRCSHFLC 115

  Fly   118 YRTRRTKMTFAEIAEAAFQKGPKWC-RGFAPVAKFSILFGLFLTYFGTCSVY------------- 168
            .|.:::.:.:::....|.:..|..| :..|...:..:.|.|.:|..|.||||             
  Rat   116 QRFKKSTLGYSDTVSFAMEASPWSCLQRQAAWGRSVVDFFLVITQLGFCSVYIVFLAENVKQVHE 180

  Fly   169 ----TVIVASNFEQLISYWTGTAVSLRMLICIMLVPLILIAWVPNLKYLAPVSMVANVFMGLGLG 229
                |.:|.||...|.......:|.||:.:...|..|||:.::..||.|..:|.:||:.|...|.
  Rat   181 GLLETTVVVSNSSDLSQVCERRSVDLRVYMLCFLPLLILLVFIRELKSLFVLSFLANISMAASLV 245

  Fly   230 ITFYYLVQDLPPVEERESVV-WSTLPQFFSITIFAMEAIGVVMPLENNMKTPQSFLGICGVLSQG 293
            |.:.|:|:.:|.......|. |...|.||...:||.|.||||:||||.|:..:.|   ...|:.|
  Rat   246 IIYQYVVRSMPDPHNLPIVAGWKKYPLFFGTAVFAFEGIGVVLPLENQMRESKRF---PQALNIG 307

  Fly   294 MSGVTLIYMLLGFLGYLRYGSATGESITLNLPIEEWPAQTVKVLISLAVYCTFGLQFFVCLEIIW 358
            |:.||::|:.|..|||:.:......|||||||.:.|..|:||:|.|..::.|:.:||:|..|||.
  Rat   308 MAIVTVLYISLATLGYMCFRDEIKGSITLNLPQDMWLYQSVKILYSFGIFVTYSIQFYVPAEIII 372

  Fly   359 DGI------KEKCKKRPTLVNYVLRTVLVTAAVVLAVAVPTIGPFMGLIGAFCFSILGLIFPVVI 417
            ..:      |.||     :.::.:|::||:.....||.:|.:...:..:||...|.|.||.|.::
  Rat   373 PAVTARLHAKWKC-----ICDFGIRSLLVSITCAGAVLIPRLDIVISFVGAVSSSTLALILPPLV 432

  Fly   418 ELIVHWESGFGK--YN-WILWKNAIITLCGIGALVFGTQAAIKDIV 460
            |::.     |.|  || |::.||..|...|....:.||...:::|:
  Rat   433 EILT-----FSKDHYNVWMVLKNISIAFTGFVGFLLGTYVTVEEII 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pathNP_001261634.1 SLC5-6-like_sbd 56..456 CDD:294310 139/427 (33%)
SdaC 67..445 CDD:223884 132/405 (33%)
Slc36a4NP_001101597.1 SLC5-6-like_sbd 54..469 CDD:294310 139/427 (33%)
PotE <223..477 CDD:223605 89/264 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54358
OrthoDB 1 1.010 - - D284074at33208
OrthoFinder 1 1.000 - - FOG0000138
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22950
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X121
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
98.930

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