DRSC/TRiP Functional Genomics Resources

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Protein Alignment path and Slc38a10

DIOPT Version :9

Sequence 1:NP_001261634.1 Gene:path / 39106 FlyBaseID:FBgn0036007 Length:471 Species:Drosophila melanogaster
Sequence 2:XP_002727892.2 Gene:Slc38a10 / 303740 RGDID:1306356 Length:1107 Species:Rattus norvegicus


Alignment Length:431 Identity:98/431 - (22%)
Similarity:184/431 - (42%) Gaps:93/431 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 LTHLLKASLGTGILGMPFAFMCSGLIMGIFSTIFTAFICTH--CSYVLVKCGHKLYYRTRRTKMT 126
            :|:::.:.:|..:|.|||.|...|:::|....:|.::: ||  |.: |||..      :...:.|
  Rat    12 VTNVVNSIVGVSVLTMPFCFKQCGIVLGALLLVFCSWM-THQSCMF-LVKSA------SLSKRRT 68

  Fly   127 FAEIAEAAFQKGPKWCRGFAPVAKFSILFGLFLTYFGTCSVYTVIV---ASNF---------EQL 179
            :|.:|..|:.|..|.      :.:.|:: ||.|   |:|..:.|::   .|||         .:.
  Rat    69 YAGLAFHAYGKAGKM------LVETSMI-GLML---GSCITFYVVIGDLGSNFFAPLLGLQVTRT 123

  Fly   180 ISYWTGTAVSLRMLICIMLVPLILIAWVPNLKYLAPVSMVANVFMGLGLGITFYYLVQDLPPVE- 243
            ...:...||||    ||:| ||.|           ..:|:|::.....:.:.||.:...:..:. 
  Rat   124 FRVFLLFAVSL----CIVL-PLSL-----------QRNMMASIQSFSAMALLFYTVFMFVIVLSS 172

  Fly   244 -----------ERESVV-WSTLPQFFSITIFAME--AIGVVMPLENNMKTPQSFLGICGVLSQGM 294
                       :|.|.: |..:  |..:.||.|.  ....|:|..:::..| |...:..:.:..:
  Rat   173 FKHGLFSGQWLQRVSYIRWEGV--FRCVPIFGMSFACQSQVLPTYDSLDEP-SVKTMSSIFASSL 234

  Fly   295 SGVTLIYMLLGFLGYLRYGSATGESITLNLPIEEWPAQTVKVLISLAVYCTFGLQFFVCLEIIWD 359
            :.||..|:::||.||:.:..||..::.::.| .....:.::|...::|...|.:....|.:.:..
  Rat   235 NVVTAFYVMVGFFGYVSFTDATTGNVLIHFP-SNLVTEMIRVGFVMSVAVGFPMMILPCRQALNT 298

  Fly   360 GIKEKCKKRPTLV--NYV--LRTVLVTAAVVL-----AVAVPTIGPFMGLIGAFCFSILGLIFPV 415
            .:.|:.:|..|..  .|:  ||..::|.:||.     .|.:|.:...:|..||...|::..|.|.
  Rat   299 LLFEQQQKDGTFAAGGYMPPLRFKVLTLSVVFGTMVGGVMIPNVETILGFTGATMGSLICFICPA 363

  Fly   416 VIELIVHWESGFGKYNWILWKNA----IITLCGIGALVFGT 452
            :|....|             |||    ::...|:|.||..|
  Rat   364 LIYKKAH-------------KNAPSAQVVLWVGLGILVVST 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pathNP_001261634.1 SLC5-6-like_sbd 56..456 CDD:294310 98/431 (23%)
SdaC 67..445 CDD:223884 92/419 (22%)
Slc38a10XP_002727892.2 SdaC 3..398 CDD:223884 98/431 (23%)
SLC5-6-like_sbd 6..381 CDD:294310 93/419 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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