DRSC/TRiP Functional Genomics Resources

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Protein Alignment path and Slc38a6

DIOPT Version :9

Sequence 1:NP_001261634.1 Gene:path / 39106 FlyBaseID:FBgn0036007 Length:471 Species:Drosophila melanogaster
Sequence 2:NP_001013117.1 Gene:Slc38a6 / 299139 RGDID:1310330 Length:457 Species:Rattus norvegicus


Alignment Length:478 Identity:91/478 - (19%)
Similarity:181/478 - (37%) Gaps:123/478 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 EQALAGNDFDPFALRDNPHPTTDNE-----TLTHLLKASLGTGILGMPFAFMCSGLIMGIFSTIF 97
            |:|:|..::.|. |.:.|.....:.     ::.:::.|.:|:||||:.:....:|::...|..:.
  Rat    22 EEAVAAEEWSPL-LSNEPRRQGSSGASFGLSVFNVMNAIMGSGILGLAYVMANTGILGFSFLLLL 85

  Fly    98 TAFICTHCSYVLV-KCGHKLYYRTRRTKMT-FAEIAEAAFQKGPKWCRGFAPVAKFSILFGLFLT 160
            .|.:.::..::|: .|.|        |.:| :.::...||        |..  .|..:...:.:.
  Rat    86 VALLASYSVHLLLAMCIH--------TAVTSYEDLGLFAF--------GLP--GKVVVAGTIIIQ 132

  Fly   161 YFGTCSVYTVIVASNFEQLIS---------YWTGTAVSLRMLICIMLV-PLILIAWVPNLKYLAP 215
            ..|..|.|.:|:.:.....||         .|......|.::||:.:| ||.|:..:..|.|.:.
  Rat   133 NIGAMSSYLLIIKTELPAAISEVLPSDHSGAWYLDGQMLLIIICVGIVFPLSLLPKIGFLGYTSS 197

  Fly   216 VSMVANVFMGLGLGITFYYL-----VQDLPPVEERESVVWSTLPQFFSI---TIFAMEAIGV--- 269
            :|....||..|.:.|..:.:     :..:..|.:..:......|:.|..   :::|:..:..   
  Rat   198 LSFFFMVFFALVVVIKKWAVPCPLTLNCINAVFQISNATDDCKPKLFHFSKESVYAIPTMAFSFL 262

  Fly   270 ----VMPLENNMKTPQSFLGICGVLSQGMSGVT--------LIYMLLGFLGYLR-YGSATGE--- 318
                |:|:...:::|.         .:.|..||        |:|.:....|||. |.....|   
  Rat   263 CHTSVLPIYCELRSPS---------KKRMQNVTNTAIALSFLVYFVSALFGYLTFYDKVESELLQ 318

  Fly   319 ---------------------SITLNLPIEEWPAQTVKVLISLAVYCTFGLQFFVCLEIIWDGIK 362
                                 ::.|.:|:..:||:...::|..:.|           ...|    
  Rat   319 GYSKYLPHDAAVMAVKLCILFAVLLTVPLIHFPARKALMMILFSNY-----------PFSW---- 368

  Fly   363 EKCKKRPTLVNYVLRTVLVTAAVVLAVAVPTIGPFMGLIGAFCFSILGLIFPVVIELIVHWESGF 427
                .|.:|....|..::    |:||:.||.|....|::||...:.|..:||.:..|.:..|   
  Rat   369 ----IRHSLTTLALNIII----VLLAIYVPDIRNVFGVVGASTSTCLIFVFPGLFYLKLSRE--- 422

  Fly   428 GKYNWILWKN-AIITLCGIGALV 449
               :::.||. ..::|...|.:|
  Rat   423 ---DFLSWKKLGALSLLSTGTVV 442

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pathNP_001261634.1 SLC5-6-like_sbd 56..456 CDD:294310 85/460 (18%)
SdaC 67..445 CDD:223884 83/438 (19%)
Slc38a6NP_001013117.1 SLC5-6-like_sbd 45..452 CDD:294310 85/454 (19%)
SdaC 45..447 CDD:223884 85/454 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54358
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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