DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment path and Slc38a8

DIOPT Version :9

Sequence 1:NP_001261634.1 Gene:path / 39106 FlyBaseID:FBgn0036007 Length:471 Species:Drosophila melanogaster
Sequence 2:NP_001009950.1 Gene:Slc38a8 / 234788 MGIID:2685433 Length:432 Species:Mus musculus


Alignment Length:442 Identity:84/442 - (19%)
Similarity:168/442 - (38%) Gaps:66/442 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 DNPHPTTDNETLTH------LLKASLGTGILGMPFAFMCSG-----LIMGIFSTIFTAFICTHCS 106
            :.|.|...:.||:.      |||::||.|:|..|:||..:|     .::.:.|.:|.........
Mouse    13 EKPLPAATHPTLSSLGAVFILLKSALGAGLLNFPWAFYKAGGMLPTFLVALVSLVFLISGLVILG 77

  Fly   107 YVLVKCGHKLYYRTRRTKMTFAEIAEAAFQKGPKWCRGFAPVAKFSILFGLFLTYFGTCSV-YTV 170
            |.....|...|....|      |:...|..|..:.|               |||.....|| :..
Mouse    78 YAASVSGQTTYQGVVR------ELCGPAMGKLCEIC---------------FLTNLLMISVAFLR 121

  Fly   171 IVASNFEQLIS---------YWTGTAVSLRMLICIMLVPLILIAWVPNLKYLAPVSMVANVFMGL 226
            ::....|:|..         ::.....:|.::..:::.||..:..:...||.:.:..:|..::.|
Mouse   122 VIGDQLEKLCDSLLPDAPQPWYAAQNFTLPLISMLVIFPLSALREIALQKYTSILGTLAACYLAL 186

  Fly   227 GLGITFYYLVQDL--PPVEERESVVWSTLPQFFSITIFAME----AIGVVMPLENNMKTPQSFLG 285
            .:.:.:|...|.|  .|........|:::...|....|..:    |:.:...:.|...:..:.:.
Mouse   187 VITVQYYLWPQGLIRQPGPLLSPSPWTSVFSVFPTICFGFQCHEAAVSIYCSMWNQSLSHWTLVS 251

  Fly   286 ICGVLSQGMSGVTLIYMLLGFLGYLRYGSATGESITLNLPIEEWPAQTVKVLISLAVYCTFGLQF 350
            :..:|:     ..|:|.|.|..|:|.:|......|.::.|..:......:||.::::...:.:..
Mouse   252 VLSLLA-----CCLVYTLTGVYGFLTFGPEVSADILMSYPGNDTAIIVARVLFAVSIVTVYPIVL 311

  Fly   351 FVCLEIIWDGIKEK---CKKRPTL-------VNYVLRTVLVTAAVVLAVAVPTIGPFMGLIGAFC 405
            |:...::.|..|:.   .:..|.|       |...|..:.|...:.:|:.:|.:...:.:||...
Mouse   312 FLGRSVMQDFWKKSYWATRGPPVLADPSGPWVRLPLTFLWVVVTLTMALFLPDLSEIISIIGGVS 376

  Fly   406 FSILGLIFP-VVIELIVHWESGFGKYNWILWKNAIITLCGIGALVFGTQAAI 456
             |....||| :.:...|..|....:....|....|:::. :|..:||...|:
Mouse   377 -SFFIFIFPGLCLICAVDTEPMGPRVKCCLEAWGILSVL-VGTFIFGQSTAV 426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pathNP_001261634.1 SLC5-6-like_sbd 56..456 CDD:294310 82/437 (19%)
SdaC 67..445 CDD:223884 76/409 (19%)
Slc38a8NP_001009950.1 SdaC 23..429 CDD:223884 82/432 (19%)
SLC5-6-like_sbd 23..421 CDD:294310 79/425 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54358
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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