DRSC/TRiP Functional Genomics Resources

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Protein Alignment path and Y4C6B.2

DIOPT Version :9

Sequence 1:NP_001261634.1 Gene:path / 39106 FlyBaseID:FBgn0036007 Length:471 Species:Drosophila melanogaster
Sequence 2:NP_001370721.1 Gene:Y4C6B.2 / 189355 WormBaseID:WBGene00021156 Length:484 Species:Caenorhabditis elegans


Alignment Length:407 Identity:95/407 - (23%)
Similarity:177/407 - (43%) Gaps:85/407 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 DNPHPTTDNE-------TLTHLLKASLGTGILGMPFAFMCSGLIMGIFSTIFTAFICTHCSYVLV 110
            |.||   .||       |...::..:.|.|::.:|.|.:.:|.:.|.|..:..|.:||:...:|.
 Worm     2 DQPH---INEKGMSILVTALFIVGETAGGGLIALPTAIVSTGAVTGAFLLLVAAVVCTYTGILLA 63

  Fly   111 K---CGHKLY--YRTRRTKMTFAEIAEAAFQKGPKWCRGFAPVAKFSILFGLFLTYFGTCSVYTV 170
            :   ...:||  ||....|...|....|.   |||:....:.:        |.:|.|||..|:.:
 Worm    64 ENWTILQELYPEYRDHCRKPYPAMGLRAI---GPKFAHFVSAM--------LQVTQFGTAVVFVL 117

  Fly   171 IVASNFEQLISYWTGTAVS---LRMLICIMLVPLILIAWVPNLKYLAPVSMVANVFMGLGLGITF 232
            :.|.|.|.::....||.||   :.:::.:::.|..|.....:..|....:|::..   :.:.:..
 Worm   118 LAAKNGENMLHANFGTHVSFCYMILIVGLLVFPFTLPKSPKDFWYAVVAAMISTT---ISVVLII 179

  Fly   233 YYLVQDLPPVEERESVVWSTLPQF-FSITIFAMEAIGVVM----------PLENNMKTPQSF--- 283
            :..|||   .|.....|:  .|.| ||.|:.   :.|.:|          .::::||.|..|   
 Worm   180 FGTVQD---YEVCHKEVF--YPSFNFSKTLM---SFGTIMFSYGGHCAFPTIQHDMKKPHHFSRS 236

  Fly   284 LGICGVLSQGMSGVTLIYMLLGFLGYLRYGSATGESITLNLP-IEEWPAQT-VKVLISLAVYCTF 346
            :.|..::      :.:.|:.:...||..|||:..:||   :| |:....|| |.:||||.|    
 Worm   237 IIIAFII------IFIFYLPVSMSGYFVYGSSLTDSI---IPSIQNINIQTIVNILISLHV---- 288

  Fly   347 GLQFFVCLEIIWDGIKEKCKKRPTLVN---------YVLRTVLVTAAVVLAVAVPTIGPFMGLIG 402
                .:.|.|.::.:.::.::   ::|         .|.|.:::.:.|.:|.:||..|..:.|:|
 Worm   289 ----SLALTITFNPLNQEFEE---ILNMSHDFGWQRIVARALVMLSVVFVAESVPNFGVLLDLVG 346

  Fly   403 AFCFSILGLIFPVVIEL 419
            ....:::.|:.|:|..|
 Worm   347 GSTITMMALVVPIVFNL 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pathNP_001261634.1 SLC5-6-like_sbd 56..456 CDD:294310 93/404 (23%)
SdaC 67..445 CDD:223884 89/386 (23%)
Y4C6B.2NP_001370721.1 SLC5-6-like_sbd 9..368 CDD:382020 90/397 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54358
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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