DRSC/TRiP Functional Genomics Resources

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Protein Alignment path and slc-36.4

DIOPT Version :9

Sequence 1:NP_001261634.1 Gene:path / 39106 FlyBaseID:FBgn0036007 Length:471 Species:Drosophila melanogaster
Sequence 2:NP_492453.1 Gene:slc-36.4 / 186798 WormBaseID:WBGene00010421 Length:481 Species:Caenorhabditis elegans


Alignment Length:487 Identity:122/487 - (25%)
Similarity:215/487 - (44%) Gaps:54/487 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 EGKVMYKIQPR-----KSDTEQALAGNDFDPFAL---RDNPHPT--------------TDNETLT 65
            |.|::.:::..     .:|..|.....:||....   ||.|:.|              :....|.
 Worm     6 EQKILIELETMPFIVGPTDNGQERKQQEFDSMGAKNDRDRPNDTKSVISTLIARKTGISATSGLI 70

  Fly    66 HLLKASLGTGILGMPFAFMCSGLIMGIFSTIFTAFICTHCSYVLVKCGHKLYYRTRRTKMTFAEI 130
            :.:...:|.|...:..:|..:||..|:.......|:..:..:.:|.|...|........:.:.|:
 Worm    71 NFICGMIGPGCFSLAVSFKQAGLWGGLALVFIVGFLSLYSMHKIVNCSQYLAKSNGDQSLDYGEM 135

  Fly   131 AEAAFQKGPKWCRGFAPVAKFSILFGLFLTYFGTCSVYTVIVASNFEQLISYWTGTA-----VSL 190
            ||||.|...||.|....:||..|...|.....|..:|:.|...   |.:|..|...|     .|.
 Worm   136 AEAAMQNSYKWARKHGKLAKIVINACLLAFQLGVITVFMVFAV---EHVIEIWEFFADSPPPFSK 197

  Fly   191 RMLICIMLVPLILIAWVPNLKYLAPVSMVANV--FMGLGLGITFYYLVQDLPPVEERESVVWSTL 253
            .::|.:..||.:|:.::.::|.|..:.:..||  |..:.| ||...:|....|..|..||   |.
 Worm   198 CVMILMYFVPQMLLNFIGHMKLLTILCLFGNVIIFAAIVL-ITKELMVHTWYPTWELGSV---TG 258

  Fly   254 PQFFSIT----IFAMEAIGVVMPLENNMKTPQSFLGICGVLSQGMSGVTLIYMLLGFLGYLRYGS 314
            .:..|:.    |::.|...:|:|:||::|.|:...|..||||..|:.||::|..|||.||:.:|.
 Worm   259 IEGISLAAGALIYSFEGQAMVLPMENSLKYPKDMTGATGVLSTAMNLVTVLYAFLGFFGYVTFGP 323

  Fly   315 ATGESITLNLPIEEWPAQTVKVLISLAVYCTFGLQFFVCLEIIWDGIKEKCKKRPTLVN----YV 375
            |...|:||||| ......::|.|:.|.::....:|.:|.::::...::.|..:...:|:    |.
 Worm   324 AVQGSLTLNLP-NSILTVSIKGLLVLKIFFGSAIQLYVIVQMLLPSLRSKISEDRKMVHRLLPYA 387

  Fly   376 LRTVLVTAAVVLAVAVPTIGPFMGLIGAFCFSILGLIFPVVIELIVHW-----ESGFGKYNWILW 435
            ||..|:..::.:|:.||.:...:.|:|.....::.||.|..::.:|..     :....|:...|.
 Worm   388 LRLGLMLISLCIALIVPNLMQIIPLVGITSGLLISLILPSFLDCMVFLPVFKKQGDMFKFYQKLI 452

  Fly   436 KNAIITLCGIGALVFGTQAAIKDIVKAYSNNE 467
            .|..:.:.|...|..|..::|.||:    ||:
 Worm   453 INVFLFVLGWFFLGAGLYSSIDDII----NND 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pathNP_001261634.1 SLC5-6-like_sbd 56..456 CDD:294310 108/433 (25%)
SdaC 67..445 CDD:223884 103/397 (26%)
slc-36.4NP_492453.1 Aa_trans 62..471 CDD:279788 107/416 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54358
OrthoDB 1 1.010 - - D284074at33208
OrthoFinder 1 1.000 - - FOG0000138
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22950
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X121
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
87.890

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