DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment path and F21D12.3

DIOPT Version :10

Sequence 1:NP_648327.1 Gene:path / 39106 FlyBaseID:FBgn0036007 Length:471 Species:Drosophila melanogaster
Sequence 2:NP_495532.2 Gene:F21D12.3 / 174201 WormBaseID:WBGene00017663 Length:496 Species:Caenorhabditis elegans


Alignment Length:425 Identity:94/425 - (22%)
Similarity:178/425 - (41%) Gaps:62/425 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 LGTGILGMPFAFMCSGLIMGIFSTIFTAFICTHCSYVLVKCGHKLYYRTRR---TKMTFAEIAEA 133
            :|.|::.||.||..|||.|||...:..|....:..|:|.|..:|:..|...   .:..|.|:|:.
 Worm    58 VGGGVVAMPVAFKLSGLPMGILIMLTVAVSFEYTGYLLGKVWNKIMERNPHIGVCRKPFPEMAKR 122

  Fly   134 AFQKGPKWCRGFAPVAKFSILFGLFLTYFGTCSVYTVIVASNFEQLISYWTGT-AVSLRMLICI- 196
            .....         :.:|:.:.| .:|.||...||.::.|:.....||:.... ::|..::|.: 
 Worm   123 TMGTN---------MQRFTSVLG-NVTQFGVSVVYLLLSANIIHFFISHVLHVDSISNCLVITVL 177

  Fly   197 --MLVPLILIA-----WVPNL-KYLAPVSMVANVFMGLGLGITFYYLVQDLPPVEERESVVWSTL 253
              ::.|..|:|     ||..: ..|..|..|.::..|:.|..|..:..... ||....|.:.|  
 Worm   178 AFLIWPFTLLASPGEFWVVIVFAMLTTVIAVVSIHTGIALDSTACFSAVSY-PVTTSTSTILS-- 239

  Fly   254 PQFFSITIFAMEAIGVVMPLENNMKTPQSFLGICGVLSQGMSGVTLIYMLLGFLGYLRYGSATGE 318
               |.|.:||.....|...::::||.|:.|   ...:..|..||.::|:.|....::.||.:..:
 Worm   240 ---FGIFLFAFSGHYVFPTIQHDMKNPRDF---TKSIFAGFLGVVILYLPLCIFAFVVYGDSMTD 298

  Fly   319 SITLNLPIEEWPAQTVKVLISLAVYCTFGLQFFVCLEIIWDGIKEKCKKRPTLVN------YVLR 377
            |:..::   :.|:..:...:.::.:|      .:.|.|:.:.:.::.:....:.:      .:.|
 Worm   299 SVIYSI---QSPSLQLLANLMISFHC------IMTLVIVINPLNQEVEHYAKISHAFGIGRVITR 354

  Fly   378 TVLVTAAVVLAVAVPTIGPFMGLIGAFCF----SILGLIFPVVIELIVHWESGFGKY-------- 430
            |:::...:.:|:.||...|.|.|:||...    ::|..:|.:..|.....|...||.        
 Worm   355 TIVLFLVLFVALTVPDFQPVMNLVGASTIPMGCAVLPSLFYLYSEAATEEEWRKGKIPTLREVLD 419

  Fly   431 ---NWILWKNAIITLCGIGALVFGTQAAIKDIVKA 462
               ..:|..|.||....|...|.|:...:..::||
 Worm   420 RTDKTVLIINLIIIFGAILGGVLGSYQGVLKLIKA 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pathNP_648327.1 SLC5-6-like_sbd 56..456 CDD:444915 92/417 (22%)
F21D12.3NP_495532.2 SLC5-6-like_sbd 42..442 CDD:444915 90/411 (22%)

Return to query results.
Submit another query.