DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment path and slc-36.2

DIOPT Version :9

Sequence 1:NP_001261634.1 Gene:path / 39106 FlyBaseID:FBgn0036007 Length:471 Species:Drosophila melanogaster
Sequence 2:NP_001040812.1 Gene:slc-36.2 / 173442 WormBaseID:WBGene00020837 Length:449 Species:Caenorhabditis elegans


Alignment Length:455 Identity:142/455 - (31%)
Similarity:232/455 - (50%) Gaps:47/455 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 GNDFDPFALRDNPHPT---------------TDNETLTHLLKASLGTGILGMPFAFMCSGLIMGI 92
            ||:..|  ||.:..||               |.::.|.|::|..:|||:|.:|.||..||:.:|:
 Worm    11 GNELLP--LRGSHQPTMGEMFASRVRDSRSITADQALIHMIKVMMGTGMLSLPLAFKHSGIWLGL 73

  Fly    93 FSTIFTAFICTHCSYVLVKCGHKLYYRTRRTKMTFAEIAEAAFQKGPKWCRGFAPVAKFSILFGL 157
            ....|...||.:|:..|:...|.:.:..|..:|.:|.:..:|.:.||.|.||...:.|..:...:
 Worm    74 ILLCFICLICIYCTRQLIFGQHYITFIKREQRMDYANVMRSAVELGPAWIRGHGYLFKQMVNINM 138

  Fly   158 FLTYFGTCSVYTVIVASNFEQLISYWTGTAVSLRMLICIMLVPLILIAWVPNLKYLAPVSMVANV 222
            |:..||.|.||.|.:|.|.:|.....:...:|....|.::|:|:..:..:..||.|||::.|||.
 Worm   139 FVAQFGFCCVYFVFMADNLKQFFDQTSSIHISQAGWIALLLIPISALCTIRELKALAPLAAVANF 203

  Fly   223 FMGLGLGITFYYLVQDLPPVEERESV-VWSTLPQFFSITIFAMEAIGVVMPLENNMKTPQSFLGI 286
            ...:.:.|....|..|..|::...:. ....||.||...:||.|.:.||:|:||.|..|..|:..
 Worm   204 VYIIAVVIVLADLFSDWQPLDSLPAFGAVENLPLFFGTVMFAFEGVAVVLPIENQMNEPIHFITP 268

  Fly   287 CGVLSQGMSGVTLIYMLLGFLGYLRYGSATGESITLNLPIEEWP-AQTVKVLISLAVYCTFGLQF 350
            .|||:.....|.|:||.:||.|:||||:...:::|||||  :.| .|.:||:..|.:..::.|||
 Worm   269 NGVLNTSCILVLLVYMTVGFFGFLRYGNDIKDTLTLNLP--QTPFYQAIKVMFVLCILVSYPLQF 331

  Fly   351 FVCLEIIWDGIKEK---CKKRPTLVNYVLR--TVLVTAAVVLAVAVPTIGPFMGLIGAFCFSILG 410
            :|.:|.:...||.|   .|:.|.:  |.:|  .||:|.|  :|..:|.:..|:.|:|:...:.|.
 Worm   332 YVPMERVEKWIKRKVVEAKQEPMI--YAIRFGGVLLTCA--MAQLIPHLALFISLVGSVAGTSLT 392

  Fly   411 LIFPVVIELIVHW-ESGFGKYNWILWKNAIITLCGIGALVF-------GTQAAIKDIVKAYSNNE 467
            |:||.:|||:..: :....|:.||  :|       ||.:.|       ||.|::..|::|:...:
 Worm   393 LVFPPLIELLCSYSKQELTKWVWI--RN-------IGLMAFAMVGFTTGTYASMVQIIEAFGKED 448

  Fly   468  467
             Worm   449  448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pathNP_001261634.1 SLC5-6-like_sbd 56..456 CDD:294310 135/429 (31%)
SdaC 67..445 CDD:223884 124/385 (32%)
slc-36.2NP_001040812.1 SLC5-6-like_sbd 37..441 CDD:382020 133/418 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 277 1.000 Domainoid score I909
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 282 1.000 Inparanoid score I1740
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54358
OrthoDB 1 1.010 - - D284074at33208
OrthoFinder 1 1.000 - - FOG0000138
OrthoInspector 1 1.000 - - mtm4749
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22950
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X121
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1010.080

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