DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment path and SLC38A3

DIOPT Version :9

Sequence 1:NP_001261634.1 Gene:path / 39106 FlyBaseID:FBgn0036007 Length:471 Species:Drosophila melanogaster
Sequence 2:NP_006832.1 Gene:SLC38A3 / 10991 HGNCID:18044 Length:504 Species:Homo sapiens


Alignment Length:542 Identity:112/542 - (20%)
Similarity:193/542 - (35%) Gaps:162/542 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVNIVDSGSKHAPQEMEQFLPGEGKVMYKIQPRKSDTEQALAGNDFDPFALRDNPHPTTDNETLT 65
            ||.:|.:| ||:...:....|..|.     |..:......:.|..|...:....|| .||.|..|
Human     9 MVELVPNG-KHSEGLLPVITPMAGN-----QRVEDPARSCMEGKSFLQKSPSKEPH-FTDFEGKT 66

  Fly    66 -------HLLKASLGTGILGMPFAFMCSGLIMGIFSTIFTAFICTHCSYVLVKCGHKLYYRTRRT 123
                   :|..|.:|:||||:.:|...:|:|:.:|.....|.:.::..::|:|....:..|    
Human    67 SFGMSVFNLSNAIMGSGILGLAYAMANTGIILFLFLLTAVALLSSYSIHLLLKSSGVVGIR---- 127

  Fly   124 KMTFAEIAEAAFQKGPKWCRGFAPVAKFSILFGLFLTYFGTCSVYTVIVAS----------NFEQ 178
                     |..|.|   .|.|....|.:....:.|...|..|.|..|:.|          |.|:
Human   128 ---------AYEQLG---YRAFGTPGKLAAALAITLQNIGAMSSYLYIIKSELPLVIQTFLNLEE 180

  Fly   179 LISYWTGTAVSLRMLICI-MLVPLILIAWVPNLKYLAPVSMVANVFMGLGLGITFYYLVQDLPP- 241
            ..|.|......|.:|:.: :::||.|:..:..|.|.:..|:...||..:.:....:::...||| 
Human   181 KTSDWYMNGNYLVILVSVTIILPLALMRQLGYLGYSSGFSLSCMVFFLIAVIYKKFHVPCPLPPN 245

  Fly   242 ----------VE----------ERESVVWSTLPQFFS----------ITIFAMEAIGVVMPLENN 276
                      ||          |.|:..:.| |.:|:          |..||......|:|:...
Human   246 FNNTTGNFSHVEIVKEKVQLQVEPEASAFCT-PSYFTLNSQTAYTIPIMAFAFVCHPEVLPIYTE 309

  Fly   277 MKTPQSFLGICGVLSQGMSGVTLIYMLLGFLGYLR-YGSATGE---------------------- 318
            :|.| |...:..:.:..::.:.::|.|....|||. |.....|                      
Human   310 LKDP-SKKKMQHISNLSIAVMYIMYFLAALFGYLTFYNGVESELLHTYSKVDPFDVLILCVRVAV 373

  Fly   319 --SITLNLPIEEWPA-QTVKVLISLAVYCTFGLQFFVCLEIIWDGIKEKCKKRPTLVNYVLRTV- 379
              ::||.:||..:|. :.::.::            |...|..|             :.:||..| 
Human   374 LTAVTLTVPIVLFPVRRAIQQML------------FPNQEFSW-------------LRHVLIAVG 413

  Fly   380 LVTAAVVLAVAVPTIGPFMGLIG----------------------------------AFCFSILG 410
            |:|...:|.:..|.|....|:||                                  |.||::||
Human   414 LLTCINLLVIFAPNILGIFGVIGATSAPFLIFIFPAIFYFRIMPTEKEPARSTPKILALCFAMLG 478

  Fly   411 -LIFPVVIE-LIVHWESGFGKY 430
             |:..:.:. :|:.|.||..::
Human   479 FLLMTMSLSFIIIDWASGTSRH 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pathNP_001261634.1 SLC5-6-like_sbd 56..456 CDD:294310 100/487 (21%)
SdaC 67..445 CDD:223884 95/469 (20%)
SLC38A3NP_006832.1 Aa_trans 64..491 CDD:279788 92/469 (20%)
SdaC 64..486 CDD:223884 92/464 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54358
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.820

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