DRSC/TRiP Functional Genomics Resources

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Protein Alignment path and slc38a10

DIOPT Version :9

Sequence 1:NP_001261634.1 Gene:path / 39106 FlyBaseID:FBgn0036007 Length:471 Species:Drosophila melanogaster
Sequence 2:XP_004916417.2 Gene:slc38a10 / 100488480 XenbaseID:XB-GENE-958197 Length:1066 Species:Xenopus tropicalis


Alignment Length:420 Identity:95/420 - (22%)
Similarity:185/420 - (44%) Gaps:63/420 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 LTHLLKASLGTGILGMPFAFMCSGLIMGIFSTIFTAFICTH--CSYVLVKCGHKLYYRTRRTKMT 126
            :.:::.:.:|..:|.|||.|...|:|:|....:..|:: ||  |.: |||..      :...:.|
 Frog     9 IMNIVNSIVGVSVLTMPFCFKQCGIILGTLLLMLCAWM-THQSCMF-LVKSA------SVSKRRT 65

  Fly   127 FAEIAEAAFQKGPKWCRGFAPVAKFSILFGLFLTYFGTCSVYTVIV----ASNFEQLISYWTGTA 187
            :|.:|..|:.|..|.      :.:.|:: ||.|   |||..:.|::    :|.|.:|:.......
 Frog    66 YAGLAFNAYGKAGKM------MVETSMI-GLML---GTCIAFYVVIGDLGSSFFARLLGLQVTEG 120

  Fly   188 VSLRML----ICIMLVPLIL----IAWVPNLKYLAPVSMVANVFMGLGLGITFYYLVQDLPPVEE 244
            ..:.:|    :||:| ||.|    :|.:.:...:|  .|...|||.:.:..:|.:.:.....::.
 Frog   121 FRVFLLFSVSLCIVL-PLSLQRNMMASIQSFSAMA--LMFYTVFMFVIVLSSFKHGLFSGQWLKH 182

  Fly   245 RESVVWSTLPQFFSITIFAME--AIGVVMPLENNMKTPQSFLGICGVLSQGMSGVTLIYMLLGFL 307
            ...|.|..:  |..|.|:.|.  ....|:|..:::..| |...:..:.:..::.||..|:.:||.
 Frog   183 VSYVRWEGV--FRCIPIYGMSFACQSQVLPTYDSLDEP-SVKIMSSIFALSLNVVTTFYITVGFF 244

  Fly   308 GYLRYGSATGESITLNLPIEEWPAQTVKVLISLAVYCTFGLQFFVCLEIIWDGIKEKCKK----- 367
            ||:.:..:...::.:|.| .....:.::|...::|...|.:....|.:.:...:.|:.:|     
 Frog   245 GYVSFTESIAGNVLVNFP-SNLVTEMIRVGFMMSVAVGFPMMILPCRQALNTLLFEQQQKDGTFT 308

  Fly   368 ----RPTLVNYVLRTVLVTAAVVLAVAVPTIGPFMGLIGAFCFSILGLIFPVVIELIVHWESGFG 428
                .|.|...||..|:|...::..:.:|.:...:||.||...|::.||.|.:|...:|.:....
 Frog   309 AGGYMPPLRFKVLTLVVVFGTMLGGILIPNVETILGLTGATMGSLICLICPALIYKKIHKKGLTS 373

  Fly   429 KYNWILWKNAIITLCGIG--ALVFGTQAAI 456
            ::           :.|:|  .||..|.|.:
 Frog   374 QF-----------ILGVGLVILVISTYATL 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pathNP_001261634.1 SLC5-6-like_sbd 56..456 CDD:294310 95/418 (23%)
SdaC 67..445 CDD:223884 89/402 (22%)
slc38a10XP_004916417.2 SLC5-6-like_sbd 3..393 CDD:382020 95/420 (23%)
PTZ00121 <396..1013 CDD:173412
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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