DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment path and slc38a11

DIOPT Version :9

Sequence 1:NP_001261634.1 Gene:path / 39106 FlyBaseID:FBgn0036007 Length:471 Species:Drosophila melanogaster
Sequence 2:XP_017952819.1 Gene:slc38a11 / 100487061 XenbaseID:XB-GENE-6045807 Length:391 Species:Xenopus tropicalis


Alignment Length:424 Identity:88/424 - (20%)
Similarity:148/424 - (34%) Gaps:119/424 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 SGLIMGIFSTIFTAFICTHCSYVLVKCGHKLYYRTRRTKMTFAEIAEAAFQKGPKWCRGFAPVAK 150
            :|..:|:...|..|::..:...:|:|.|      :.....|:..:....|        ||.....
 Frog     4 AGFPLGLLLLIGVAYVTDYSMILLIKGG------SMSGTNTYQSLVSKTF--------GFPGYFL 54

  Fly   151 FSILFGLFLTYFGTCSVYTVIVASNFEQLI---------SYWTGTAVSLRMLICIMLVPLILIAW 206
            .|:|  .||..|.....|.::......::|         |::....|.:.:...::.:|   ||.
 Frog    55 LSVL--QFLYPFAAMISYNIVTGDILPKIIQRIPGVSHDSWYVDRHVVIVLSTAVITLP---IAL 114

  Fly   207 VPNLKYLAPVSMVANVFMGLGLGITFYYLV----------QDLPPVEERESVVWSTLPQFFSITI 261
            ..|::.|..||:       |.|.:||..||          .::|..|:......|.         
 Frog   115 YRNMEKLGKVSL-------LSLLLTFTVLVIIIVRATSLTSEIPHTEDAWDFARSN--------- 163

  Fly   262 FAMEAIGVVMPLENNMKTPQSFLGIC--------GVLSQGMSG----VTLIYMLLGF-------- 306
             ||:|:||:           ||:.:|        |.|.:...|    :|.:.|||..        
 Frog   164 -AMQAVGVM-----------SFVFMCHHACFLIYGSLEKATVGNWSRITHVSMLLSLFISLQYSV 216

  Fly   307 LGYLRYGSATGESITLNLPIEEWPAQTVKVLISLAVYCTFGLQFFVCLEII----WDGIKEKCKK 367
            .||:.:...|...:..|...|:..|...:...::.:..|:.::.||..|:|    :.|       
 Frog   217 FGYVSFTGFTQGDLFENYCREDNLATIGRFCYAITIILTYPMECFVAREVISNVFFGG------- 274

  Fly   368 RPTLVNYVLRTVLVTAAVVLAVAVPTI----GPFMGLIGAFCFSILGLIFPVVIELIVHWESGFG 428
               .:.|.|...:..|.|.|..||..:    |.|:.|.|....:.|..|.|....|         
 Frog   275 ---NLPYPLHLAVTVAIVSLTTAVSLVYDCLGMFLELNGVLSATPLVFIIPPACYL--------- 327

  Fly   429 KYN---WILWKNA---IITLCGIGALVFGTQAAI 456
            |.:   |....||   :|.|.|:..:..|...||
 Frog   328 KQSEKPWYHLDNAMPLLILLLGVVIMPAGFIMAI 361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pathNP_001261634.1 SLC5-6-like_sbd 56..456 CDD:294310 86/422 (20%)
SdaC 67..445 CDD:223884 84/411 (20%)
slc38a11XP_017952819.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54358
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.