DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment path and slc38a8a

DIOPT Version :9

Sequence 1:NP_001261634.1 Gene:path / 39106 FlyBaseID:FBgn0036007 Length:471 Species:Drosophila melanogaster
Sequence 2:NP_001138287.1 Gene:slc38a8a / 100004247 ZFINID:ZDB-GENE-121005-5 Length:441 Species:Danio rerio


Alignment Length:451 Identity:97/451 - (21%)
Similarity:172/451 - (38%) Gaps:102/451 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 LLKASLGTGILGMPFAFMCSGLIMGIFSTIFTAFICTHCSYV-----LVKCGHKLYYRTRRT-KM 125
            :||::||.|:|..|:||..:|   ||...:....|    |.|     ||..|:......|.| :.
Zfish    33 MLKSALGAGLLIFPWAFAKAG---GIHFAVTVEMI----SLVFLISGLVILGYSSSVSGRNTYQG 90

  Fly   126 TFAEIAEAAFQKGPKWCRGFAPVAKFSILFGLFLTYFGTCSV-YTVIVASNFEQL---------- 179
            ...:|...|..|          :.:...:|.||.     .|| :.||||....:|          
Zfish    91 VVTDICGPAIGK----------LCEICYVFNLFF-----ISVAFLVIVADQLHKLCLSMYELITG 140

  Fly   180 -------ISYWTGTAVSLRMLICIMLVPLILIAWVPNLKYLAPVSMVANVFMGLGLGITFYYLVQ 237
                   ..::|....:|.:|..:.:.||.:...:...||.:.:...|..::.:.:.:.::    
Zfish   141 LPESEMPYHWYTDQRFALFLLCLLFIFPLSVPKEISIQKYTSVLGTFAAAYLTVAIVVKYH---- 201

  Fly   238 DLPPVEERESVVWSTLPQFFSITIFAMEAIGVVMP------------------LENNMKTPQSFL 284
             :.|:.|      ..|...:|..|.:.:::..|:|                  :||...:...|:
Zfish   202 -MRPIHE------INLSPLYSSGISSWDSVFSVIPTICFGFQCHEACVAVYSSMENRRLSHWVFI 259

  Fly   285 GICGVLSQGMSGVTLIYMLLGFLGYLRYGSATGESITLNLPIEEWPAQTVKVLISLAVYCTFGLQ 349
            .:..:|.     ..|||.|.|..|||.:|......|.::....:......::|..:::...:.:.
Zfish   260 SVLSMLI-----CLLIYSLTGVFGYLTFGKNVAPDILMSYSGGDVTMIVARLLFGISIITIYPII 319

  Fly   350 FFVCLEIIWDG-IKEKCKKRPTLVNY------VLRTVLVTAAVVLAVAVPTIGPFMGLIGA---- 403
            ..:...:|.|. ::.:.|......:|      .|.|..||..:::||.:|.|...:.::|.    
Zfish   320 VLLGRSVIQDPLLRRRLKHTAVTESYESRTRVALTTAWVTVTLLIAVFIPDISKVISVVGGVSAF 384

  Fly   404 --FCFSILGLIFPVVIELIVHWESGFGKYNWILWKNAIITLCGIGALVFG--TQAAIKDIV 460
              |.|..|.|||.|..|.:    |...:|..:.| ..|..||  |.|:||  |..||..::
Zfish   385 FIFIFPGLCLIFVVQSESV----SPTMRYLLVTW-GMITLLC--GTLIFGQSTSVAIMQLI 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pathNP_001261634.1 SLC5-6-like_sbd 56..456 CDD:294310 95/445 (21%)
SdaC 67..445 CDD:223884 90/432 (21%)
slc38a8aNP_001138287.1 SdaC 17..435 CDD:223884 96/446 (22%)
SLC5-6-like_sbd 29..435 CDD:294310 96/446 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54358
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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