DRSC/TRiP Functional Genomics Resources

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Protein Alignment pall and fbxo28

DIOPT Version :9

Sequence 1:NP_648325.2 Gene:pall / 39104 FlyBaseID:FBgn0036005 Length:314 Species:Drosophila melanogaster
Sequence 2:NP_001314764.1 Gene:fbxo28 / 556288 ZFINID:ZDB-GENE-030131-4665 Length:344 Species:Danio rerio


Alignment Length:327 Identity:125/327 - (38%)
Similarity:186/327 - (56%) Gaps:45/327 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LLDLPQTLIQDILELLPYDEVAKKREVCTLFNYLGQQILNKGFNKIIMAHAKNFKRIKSMLPRRE 67
            ||.||...|..||..|.|||::..|.||...:.:.|::||:||.|:...|:...|::|:.|||||
Zfish    40 LLGLPIVAIDTILNFLTYDEISLLRLVCKRMDMICQRMLNQGFLKVERYHSLCQKQVKAQLPRRE 104

  Fly    68 SERRNHILSRHSDILTSIETRISMLTMTYSKFIDLNICCFIPGRVLDEINSILRILSTSTKQLRP 132
            ||||||.|:||:|||.::|||:|:|.||:.|::|.|:||||||:|:|||..:||.::::....|.
Zfish   105 SERRNHSLARHADILAAVETRLSLLNMTFMKYVDSNLCCFIPGKVIDEIYRVLRYVNSTRAPQRA 169

  Fly   133 HEVLQELRDISSMAIEHFDEKIAVNFKLEHRKQLAESTAAGARLVVCSALGDIS-----FSGVRR 192
            ||||||||||||||:|:|||||....|    |:|..:..:| ||:..:.:...|     .|.:.:
Zfish   170 HEVLQELRDISSMAMEYFDEKIVPILK----KRLPGADLSG-RLIGSAPVAGPSTSLTTMSLLAK 229

  Fly   193 TGISRPVDHGLVQQAIVQLAPISASKSHSDSSQKDRMSKQLFKQYQLQRSLSQKIRLLEVSRKVQ 257
            ...||.....|.||..|..|.::|.:.   ..|:.|: |||.:|.|||.               |
Zfish   230 NTPSRSEMTKLQQQVKVNGASMTALRR---EMQEVRL-KQLEQQKQLQD---------------Q 275

  Fly   258 DRRLQEALSSITELTTQVSELKRQMEDVV-------------ANMPSCAVKRQAVASADCLPPAL 309
            :::|||....|.|...:::||:.::.|::             |:..|..|||::.:.   ||...
Zfish   276 EQKLQEQSQVIGEQNARLAELEHKLRDLMDRAVGAGDPDAAAASSQSLCVKRRSCSE---LPRHS 337

  Fly   310 KK 311
            |:
Zfish   338 KR 339



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170587950
Domainoid 1 1.000 182 1.000 Domainoid score I3388
eggNOG 1 0.900 - - E1_28KQY
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 183 1.000 Inparanoid score I3960
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D346120at33208
OrthoFinder 1 1.000 - - FOG0008425
OrthoInspector 1 1.000 - - oto39773
orthoMCL 1 0.900 - - OOG6_110167
Panther 1 1.100 - - LDO PTHR13252
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5631
SonicParanoid 1 1.000 - - X6415
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1312.830

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