DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jarid2 and KDM5D

DIOPT Version :10

Sequence 1:NP_648324.1 Gene:Jarid2 / 39103 FlyBaseID:FBgn0036004 Length:2351 Species:Drosophila melanogaster
Sequence 2:NP_001140177.1 Gene:KDM5D / 8284 HGNCID:11115 Length:1570 Species:Homo sapiens


Alignment Length:807 Identity:191/807 - (23%)
Similarity:306/807 - (37%) Gaps:241/807 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly  1740 EAPIFRPTEKEFADPIEFIERITPIAARFGICKIIPPASFKPECRIS-DEMRFTAYNQYVHKMLH 1803
            |.|:|.|:..||.||:.:|.:|.|||.:.|||||.|||.::|...:. |..|||...|.::::..
Human    13 ECPVFEPSWAEFQDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEVDNFRFTPRVQRLNELEA 77

  Fly  1804 RWGPSAKELSAIKKYLATQSIVMNHPPWIGGME---VDLPRLYHTVQELGGLKEVIEKKKWARVA 1865
            :.......|..|.|:...|...:..|    .:|   :||..|...|.|.||.:.:.:.::|||||
Human    78 QTRVKLNYLDQIAKFWEIQGSSLKIP----NVERKILDLYSLSKIVIEEGGYEAICKDRRWARVA 138

  Fly  1866 EEMCIPKLAQDRVTKLDDIYCKYLLPYDTLSPAE--------------------------RQKLF 1904
            :.:..|. .::..:.|...|.:.:.||:......                          ||.:.
Human   139 QRLHYPP-GKNIGSLLRSHYERIIYPYEMFQSGANHVQCNTHPFDNEVKDKEYKPHSIPLRQSVQ 202

  Fly  1905 DEVEADWAKREARAR-----------------------------------RNADRFVN------- 1927
            ....:.:::|..|.:                                   ::.|:.|:       
Human   203 PSKFSSYSRRAKRLQPDPEPTEEDIEKHPELKKLQIYGPGPKMMGLGLMAKDKDKTVHKKVTCPP 267

  Fly  1928 TESVSNEED---DLSS----------------------------------------DEDEE---- 1945
            |.:|.:|:.   ::||                                        |||::    
Human   268 TVTVKDEQSGGGNVSSTLLKQHLSLEPCTKTTMQLRKNHSSAQFIDSYICQVCSRGDEDDKLLFC 332

  Fly  1946 ---------------SEEEIDGV--SMECIVKGRSMP--------LSQFYRI-ARNTMALWFKS- 1983
                           ..|...|:  ..:||:.....|        .:|.|.: :...||..||| 
Human   333 DGCDDNYHIFCLLPPLPEIPRGIWRCPKCILAECKQPPEAFGFEQATQEYSLQSFGEMADSFKSD 397

  Fly  1984 -------TDPTVNEVEAEFWRHVAVRDSHVCVHSGS-IDSSGWGYGFP--------SP------- 2025
                   ..|| ..||.||||.|:..:..|.|..|: |.|..:|.|||        ||       
Human   398 YFNMPVHMVPT-ELVEKEFWRLVSSIEEDVTVEYGADIHSKEFGSGFPVSNSKQNLSPEEKRQSL 461

  Fly  2026 -------------------GPKGKG-SNYARHPWNLKVLTNNSGSVLRSL-GPVMGVTVPTLHVG 2069
                               .||..| ..||...|||.|:.....|||..: ..:.|:.||.|:||
Human   462 TVLTRLISSFWAQAVLPPWPPKVLGLQEYATSGWNLNVMPVLDQSVLCHINADISGMKVPWLYVG 526

  Fly  2070 MLFSACCWYRDPHGLSWIEYLHTGASKLWYGIPDDQSANFRAALTSLIPTHCQNKTIWLPCDTVM 2134
            |:|||.||:.:.|....|.|||.|..|.|||:|...:.:....:..|.|....::...|.....:
Human   527 MVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEEVMKMLTPELFDSQPDLLHQLVTL 591

  Fly  2135 VPPHMLTDRGVSLCRIEQKPGEFIVVFPRAYTSSLATGYVVSESVYFATMSWLDLAK---DDFRD 2196
            :.|:.|...||.:.|..|..|||::.|||||.|....||..:|:|.|.|..||...:   :.:|.
Human   592 MNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPAGRQCIEHYRR 656

  Fly  2197 IHESCEPAMFSLEQLLFAL-GYDQRVN---SEALH-QMLPMLNDVCEKESAAREQLRAAGVTSTE 2256
            :...|   :||.|:|:..: .:.:.::   :.|:| :|..|:    ::|...|:.|...|||..|
Human   657 LRRYC---VFSHEELICKMAAFPETLDLNLAVAVHKEMFIMV----QEERRLRKALLEKGVTEAE 714

  Fly  2257 KVQAEKGQKAKKQQQPPYKSIESECDLCRANLYISMVRTED--GNIYCLQHALKNLNNGNIQAKQ 2319
            :...|.           ....|.:|..|:...::|.:...|  ..:.||.|    :|:      .
Human   715 REAFEL-----------LPDDERQCIKCKTTCFLSALACYDCPDGLVCLSH----IND------L 758

  Fly  2320 CK-------LIYAYNVDDIQQLIRQLQ 2339
            ||       |.|.|.:|::..::.:|:
Human   759 CKCSSSRQYLRYRYTLDELPTMLHKLK 785

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jarid2NP_648324.1 PHA03247 <157..429 CDD:223021
Atrophin-1 762..>986 CDD:460830
JmjN 1740..1781 CDD:128818 21/40 (53%)
ARID_JARD2 1804..1915 CDD:350634 25/139 (18%)
cupin_RmlC-like 2066..2181 CDD:477354 42/114 (37%)
zf-C5HC2 2281..2334 CDD:460750 14/61 (23%)
KDM5DNP_001140177.1 JmjN 13..54 CDD:128818 21/40 (53%)
ARID_KDM5C_5D 79..170 CDD:350639 23/95 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 192..228 4/35 (11%)
PHD1_KDM5C_5D 316..361 CDD:277077 5/44 (11%)
JmjC 522..638 CDD:396791 42/115 (37%)
zf-C5HC2 728..780 CDD:460750 14/61 (23%)
PLU-1 793..1118 CDD:462475
PHD2_KDM5C_5D 1205..1265 CDD:277081
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1460..1552
Blue background indicates that the domain is not in the aligned region.

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