Sequence 1: | NP_648324.1 | Gene: | Jarid2 / 39103 | FlyBaseID: | FBgn0036004 | Length: | 2351 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_680116.2 | Gene: | REF6 / 824002 | AraportID: | AT3G48430 | Length: | 1360 | Species: | Arabidopsis thaliana |
Alignment Length: | 666 | Identity: | 153/666 - (22%) |
---|---|---|---|
Similarity: | 234/666 - (35%) | Gaps: | 222/666 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 1741 APIFRPTEKEFADPIEFIERITPIAARFGICKIIPPASFKPECRISDEMRFTAYNQYVHKMLHRW 1805
Fly 1806 GPSAK-ELSAIKKYLATQSIVMNHPPWIGGMEVDLPRLYHTVQELGGLKEVIEKKKWARVAEEMC 1869
Fly 1870 IPKLAQDRVTKLDDI-YCKYLLPYDTLSPAERQKLFDEVEADWAKREARARRNADRFVNTESVSN 1933
Fly 1934 EEDDLSSDEDEESEEEIDGVSMECIVKGRSMPLSQFYRIARNTMALWFKSTDPTVNEVEAEFWRH 1998
Fly 1999 VAVRDSHVCVHSGSIDSSGWGYGFPSPGPK---------------GKGSNYARHPWNLKVLTNNS 2048
Fly 2049 GSVLRSL-GPVMGVTVPTLHVGMLFSACCWYRDPHGLSWIEYLHTGASKLWYGIPDDQSANFRAA 2112
Fly 2113 LTSLIPTHCQNKTI-------WLPCDTVMVPPHMLTDRGVSLCRIEQKPGEFIVVFPRAYTSSLA 2170
Fly 2171 TGYVVSESVYFATMSWLDLAKDDFRDIHESC--EPAMFSLEQLL--FALGYDQRVNSEALHQMLP 2231
Fly 2232 MLNDVCEKESAAREQLRAAGVTSTEKVQAE-------------KGQKAKKQQQPPYKSIESECDL 2283
Fly 2284 CRANLYISMVRTEDGNIYCLQHALKNLNNGNIQAKQCKLIYAYNVDDIQQLIRQLQEKI------ 2342
Fly 2343 --------NHKAAVKK 2350 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Jarid2 | NP_648324.1 | JmjN | 1740..1781 | CDD:128818 | 22/39 (56%) |
ARID | 1812..1893 | CDD:279697 | 12/81 (15%) | ||
JmjC | 2066..2181 | CDD:202224 | 39/121 (32%) | ||
zf-C5HC2 | 2281..2334 | CDD:280996 | 11/52 (21%) | ||
REF6 | NP_680116.2 | JmjN | 21..52 | CDD:280526 | 17/30 (57%) |
JmjC | 233..352 | CDD:202224 | 39/122 (32%) | ||
C2H2 Zn finger | 1245..1266 | CDD:275368 | |||
C2H2 Zn finger | 1268..1290 | CDD:275368 | |||
C2H2 Zn finger | 1298..1320 | CDD:275368 | |||
C2H2 Zn finger | 1328..1348 | CDD:275368 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 1 | 1.000 | 52 | 1.000 | Domainoid score | I4277 |
eggNOG | 1 | 0.900 | - | - | E1_COG0055 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D664180at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR10694 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.920 |