DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jarid2 and JARID2

DIOPT Version :9

Sequence 1:NP_648324.1 Gene:Jarid2 / 39103 FlyBaseID:FBgn0036004 Length:2351 Species:Drosophila melanogaster
Sequence 2:XP_011512881.1 Gene:JARID2 / 3720 HGNCID:6196 Length:1309 Species:Homo sapiens


Alignment Length:1353 Identity:369/1353 - (27%)
Similarity:585/1353 - (43%) Gaps:327/1353 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly  1121 NSAATG-GGAGANSDPLKDEIGSILAQATLMPSKE-ESG------KIFGIASVSLAQSSGPDNTK 1177
            |..:.| |.|...|:..||:...:.:.:..:.|.: |.|      ::......:.:|.:.|..|.
Human   113 NDQSKGLGPASEQSENEKDDASQVSSTSNDVSSSDFEEGPSRKRPRLQAQRKFAQSQPNSPSTTP 177

  Fly  1178 CTLGKCGSIHKPVLGPVVPTEGYFGDQLSSKERRKAKV----------NMTHEQIQKWLIECSSN 1232
            .      .|.:|:|.|.       ..|:|...:||.|.          ..|.:...:..:|.:.:
Human   178 V------KIVEPLLPPP-------ATQISDLSKRKPKTEDFLTFLCLRGKTLQPSAEVYVESTCS 229

  Fly  1233 P---------------DEIQDDLDDDFDD------SLRPQQSTTPPPTRDDKELSAS--FSSSSK 1274
            |               :|:::: ||:.:|      :......:||...:..|.:...  |:.||:
Human   230 PALPNSMVYFGSSQDEEEVEEE-DDETEDVKTATNNASSSCQSTPRKGKTHKHVHNGHVFNGSSR 293

  Fly  1275 NTRGDLGKSESAWSAKGPSLKATPVLVTPPNRKELHEQADSKDCDALDYDKSSTPVNLTQKITSN 1339
            :||           .|.|..|......||...|....:|||                        
Human   294 STR-----------EKEPVQKHKSKEATPAKEKHSDHRADS------------------------ 323

  Fly  1340 ESLAVEKKVNDRKGKESAK--AAASKAATQPRSTAAT---PPTPISSTPTPASLTPSKSSPTPPP 1399
                       |:.:.||.  |||....:..:..|||   ||                       
Human   324 -----------RREQASANHPAAAPSTGSSAKGLAATHHHPP----------------------- 354

  Fly  1400 AVKQKAEKGKRNATAGGGATALASPPAAPTPA--------NPKRTPVYN---QKNA----KAQQQ 1449
             :.:.|:..::..:...|.|.::|..|..|.|        :|.:|..|.   .|.|    ||:::
Human   355 -LHRSAQDLRKQVSKVNGVTRMSSLGAGVTSAKKMREVRPSPSKTVKYTATVTKGAVTYTKAKRE 418

  Fly  1450 QA-ETKPASNPPSGAGTKRESVYAFGKDDESGSKSGNRRRT----DPSPVPAPAL----VPNALS 1505
            .. :|||..:.||.|.....|    ||.:.|.:|:  |::.    ..|....||:    |...|:
Human   419 LVKDTKPNHHKPSSAVNHTIS----GKTESSNAKT--RKQVLSLGGASKSTGPAVNGLKVSGRLN 477

  Fly  1506 ERSPTKKRAAAAAAATAVQLTLSPTENCKIEGKPSKAPTGRGAKK---QQQQAPAPPAPPVEASG 1567
            .:|.||: .........:||.         ||.       |.:|:   :..||..|.:||.:..|
Human   478 PKSCTKE-VGGRQLREGLQLR---------EGL-------RNSKRRLEEAHQAEKPQSPPKKMKG 525

  Fly  1568 DSDAEGATFYIPLQGAGVGGSGDGGIQGVAVKLGREGPDGPNQKVVMQATLVTKAQMDTNSKPLP 1632
               |.|     |.:|.|.....:.|:....||                             |.:|
Human   526 ---AAG-----PAEGPGKKAPAERGLLNGHVK-----------------------------KEVP 553

  Fly  1633 E-SLNTNELVKTLLHAASNDAASTTTSLKSLPKASTSAAAGAAAAPGASSLVRVNSNSSLFSGSA 1696
            | ||..|.                       ||.:|:    ..:.||.      .::....|.|.
Human   554 ERSLERNR-----------------------PKRATA----GKSTPGR------QAHGKADSASC 585

  Fly  1697 KSRTAAQTSSTAAAVAKKYKDDTPIKMANNTAFPRHDDPTQMVEAPIFRPTEKEFADPIEFIERI 1761
            ::|:.:|..|     ..|.:|....:.....|     ....|.|.|:.||:.|||.||:.:||.:
Human   586 ENRSTSQPES-----VHKPQDSGKAEKGGGKA-----GWAAMDEIPVLRPSAKEFHDPLIYIESV 640

  Fly  1762 TPIAARFGICKIIPPASFKPECRISDEMRFTAYNQYVHKMLHRWGPSAKELSAIKKYLATQSIVM 1826
            .....:||:|::|||..::|||:::|||||....|::||:..||||:.:.|:.|||:|.:|.|.|
Human   641 RAQVEKFGMCRVIPPPDWRPECKLNDEMRFVTQIQHIHKLGRRWGPNVQRLACIKKHLKSQGITM 705

  Fly  1827 NHPPWIGGMEVDLPRLYHTVQELGGLKEVIEKKKWARVAEEMCIPKLAQDRVTKLDDIYCKYLLP 1891
            :..|.|||.|:||...:..:.|:||:::|.:.|||.::|:.:.||:.||||:.||.:.||:|||.
Human   706 DELPLIGGCELDLACFFRLINEMGGMQQVTDLKKWNKLADMLRIPRTAQDRLAKLQEAYCQYLLS 770

  Fly  1892 YDTLSPAERQKLFDEVEADWAKREAR-------------------------------ARRNADRF 1925
            ||:|||.|.::|..||..:....|.|                               |.||..|.
Human   771 YDSLSPEEHRRLEKEVLMEKEILEKRKGPLEGHTENDHHKFHPLPRFEPKNGLIHGVAPRNGFRS 835

  Fly  1926 ----VNTESVSNEEDDLSSDEDE--ESEEEIDGVSME---CIVKGRSMPLSQFYRIARNTMALWF 1981
                |....:......|.:.|.|  :.|||..||..:   ||.||||:.|:.|||.|||.|::.|
Human   836 KLKEVGQAQLKTGRRRLFAQEKEVVKEEEEDKGVLNDFHKCIYKGRSVSLTTFYRTARNIMSMCF 900

  Fly  1982 KSTDPTVNEVEAEFWRHVAVRDSHVCVHSGSIDSSGWGYGFPSPGPKGKGSNYARHPWNLKVLTN 2046
             |.:|...|:|.|:||.|..:|.||.||.|.:|::..|.||    |.||...::||.|||.||.|
Human   901 -SKEPAPAEIEQEYWRLVEEKDCHVAVHCGKVDTNTHGSGF----PVGKSEPFSRHGWNLTVLPN 960

  Fly  2047 NSGSVLRSLGPVMGVTVPTLHVGMLFSACCWYRDPHGLSWIEYLHTGASKLWYGIPDDQSANFRA 2111
            |:||:||.||.|.|||:|.|::||:||..||.||.:.|.:|:||||||..:||.||.::......
Human   961 NTGSILRHLGAVPGVTIPWLNIGMVFSTSCWSRDQNHLPYIDYLHTGADCIWYCIPAEEENKLED 1025

  Fly  2112 ALTSLIPTHCQNKTIWLPC--DTVMVPPHMLTDRGVSLCRIEQKPGEFIVVFPRAYTSSLATGYV 2174
            .:.:|:..   |.|..|..  ..||:.|.:|...|:.:.|..|:.|:|:|.||.::.|.:..||.
Human  1026 VVHTLLQA---NGTPGLQMLESNVMISPEVLCKEGIKVHRTVQQSGQFVVCFPGSFVSKVCCGYS 1087

  Fly  2175 VSESVYFATMSWLDLAKDDFRDIHESCEPAMFSLEQLLFALGYDQ--RVNSEALHQMLPMLNDVC 2237
            |||:|:|||..|..:..:..:::........||:|:||:.:...:  :.|...|..:..:|:::.
Human  1088 VSETVHFATTQWTSMGFETAKEMKRRHIAKPFSMEKLLYQIAQAEAKKENGPTLSTISALLDELR 1152

  Fly  2238 EKESAAREQLRAAGVTSTEKVQAEKGQ------KAKKQQQPPYKSIESECDLCRANLYISMVRTE 2296
            :.|...|.||..||:.|:.:..:..|.      |.|.::....::.|..|.:|:...|:|||..|
Human  1153 DTELRQRRQLFEAGLHSSARYGSHDGSSTVADGKKKPRKWLQLETSERRCQICQHLCYLSMVVQE 1217

  Fly  2297 DGN-IYCLQHALKNLNNGNIQAKQC---KLIYAYNVDDIQQLIRQLQEKINHK 2345
            :.| ::||:.||:::.    :.|.|   ||:|.|:.:.|..|:.|:..|::.|
Human  1218 NENVVFCLECALRHVE----KQKSCRGLKLMYRYDEEQIISLVNQICGKVSGK 1266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jarid2NP_648324.1 JmjN 1740..1781 CDD:128818 17/40 (43%)
ARID 1812..1893 CDD:279697 36/80 (45%)
JmjC 2066..2181 CDD:202224 44/116 (38%)
zf-C5HC2 2281..2334 CDD:280996 19/56 (34%)
JARID2XP_011512881.1 JmjN 619..660 CDD:128818 17/40 (43%)
BRIGHT 686..777 CDD:128777 41/90 (46%)
JmjC 979..1094 CDD:202224 44/117 (38%)
zf-C5HC2 1202..1255 CDD:280996 19/56 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165141110
Domainoid 1 1.000 115 1.000 Domainoid score I6035
eggNOG 1 0.900 - - E1_COG0055
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 479 1.000 Inparanoid score I1483
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D664180at2759
OrthoFinder 1 1.000 - - FOG0007182
OrthoInspector 1 1.000 - - oto89335
orthoMCL 1 0.900 - - OOG6_109452
Panther 1 1.100 - - O PTHR10694
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R6120
SonicParanoid 1 1.000 - - X5293
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1413.790

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