Protein Alignment Jarid2 and Kdm4A

DIOPT Version :9

• Sequence 1: NP_648324.1
• Gene: Jarid2 / 39103
• FlyBaseID: FBgn0036004
• Length: 2351
• Species: Drosophila melanogaster
• Sequence 2: NP_610331.1
• Gene: Kdm4A / 35744
• FlyBaseID: FBgn0033233
• Length: 495
• Species: Drosophila melanogaster
• Alignment Length: 376
• Identity: 85/376 - (22%)
• Similarity: 136/376 - (36%)
• Gaps: 72/376 - (19%)

  Fly  1945 ESEEEIDGVSME-----C-IVKG-------------RSMPLSQFYRIARNTMALWFKSTDPTVNE 1990
            :|..:||.::|.     | :|.|             |.|.|.||...|.:.:....:..|  .::
  Fly    61 KSGYDIDNINMTIPAPICQVVTGAHGVYQQINIQQRRQMTLRQFMEKANSELHQTPRHFD--YDD 123

  Fly  1991 VEAEFWRHVAVRDSHVCVHSGSIDSSGWGYGFPSP----GPKGKGSNYARHPWN------LKVLT 2045
            :|.::|:::.                     :.||    ..||..|:.....||      :..|.
  Fly   124 LERKYWKNIT---------------------YISPLYAADVKGSLSDEDLDVWNIGRLDTILNLV 167

  Fly  2046 NNSGSVLRSLGPVMGVTVPTLHVGMLFSACCWYRDPHGLSWIEYLHTGASKLWYGIPDDQSANFR 2110
            |...:::     :.||....|:.||..|:..|:.:...|..|.|||.||.|.||.||........
  Fly   168 NTDYNII-----IDGVNTAYLYFGMWKSSFAWHTEDMDLYSINYLHFGAPKTWYAIPPAYGRRLE 227

  Fly  2111 AALTSLIPTHCQNKTIWLPCDTVMVPPHMLTDRGVSLCRIEQKPGEFIVVFPRAYTSSLATGYVV 2175
            .........:.|....:|.....|:.|.:|....:...:|.|:.||.::.||..|.:....|:..
  Fly   228 KLANETFSENYQECNAYLRHKMTMISPKVLRQHNIPYNKITQEAGEIMITFPFGYHAGFNHGFNG 292

  Fly  2176 SESVYFATMSWLDLAKDDFRDIHESCEPAMFSLEQLLFALGYDQRVNSEALHQMLPMLNDVCEKE 2240
            :||..||:..|::..|   |.....|...|..:....|.    :|...|.....|...:..|..|
  Fly   293 AESTNFASKRWIEYGK---RASICRCRSDMVKISMETFV----RRFQPERYDNWLKGQDMGCHPE 350

  Fly  2241 SAAREQLRAAGVTSTEKVQAEKGQKAKKQQQPPYKSIESECDL----CRAN 2287
            ...: ...||..|..|..:.|..:.||.:::.|.|   ..|.|    |..|
  Fly   351 EPGK-ICAAAPPTLNEYEKQENLRAAKSEEESPQK---RGCSLAGNGCERN 397

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Jarid2	NP_648324.1	JmjN	1740..1781	CDD:128818
		ARID	1812..1893	CDD:279697
		JmjC	2066..2181	CDD:202224	32/114 (28%)
		zf-C5HC2	2281..2334	CDD:280996	4/11 (36%)
Kdm4A	NP_610331.1	JmjN	17..59	CDD:301729
		JmjC	182..298	CDD:202224	32/115 (28%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45455776
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR10694
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	3	2.940