| Sequence 1: | NP_648324.1 | Gene: | Jarid2 / 39103 | FlyBaseID: | FBgn0036004 | Length: | 2351 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001264106.1 | Gene: | Kdm5a / 312678 | RGDID: | 1305429 | Length: | 1690 | Species: | Rattus norvegicus |
| Alignment Length: | 762 | Identity: | 187/762 - (24%) |
|---|---|---|---|
| Similarity: | 290/762 - (38%) | Gaps: | 178/762 - (23%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 1740 EAPIFRPTEKEFADPIEFIERITPIAARFGICKIIPPASFKP--ECRISDEMRFTAYNQYVHKML 1802
Fly 1803 HRWGPSAKELSAIKKYLATQSIVMNHPPWIGGMEVDLPRLYHTVQELGGLKEVIEKKKWARVA-- 1865
Fly 1866 -----------------EEMCIP-KLAQDRVT----KLDDIYCKYLLPYDTLS------------ 1896
Fly 1897 ----PAERQKLFDEVEADWAKREAR-------------------ARRNADRFVNTESVSNEED-- 1936
Fly 1937 ----------------DL--------SSDED---------------------------------- 1943
Fly 1944 --EESEEEIDGVSMECIVKGRSMPLSQFYRIARNTMALWFK---STDPTVNEVEAEFWRHVAVRD 2003
Fly 2004 SHVCVHSGS-IDSSGWGYGFPSPGPKGK----GSNYARHPWNLKVLTNNSGSVLRSLG-PVMGVT 2062
Fly 2063 VPTLHVGMLFSACCWYRDPHGLSWIEYLHTGASKLWYGIPDDQSANFRAALTSLIPTHCQNKTIW 2127
Fly 2128 LPCDTVMVPPHMLTDRGVSLCRIEQKPGEFIVVFPRAYTSSLATGYVVSESVYFATMSWLDLAK- 2191
Fly 2192 --DDFRDIHESCEPAMFSLEQLLFALGYDQRVNSEALHQML-PMLNDVCEKESAAREQLRAAGVT 2253
Fly 2254 STEKVQAEKGQKAKKQQQPPYKSIESECDLCRANLYISMV--RTEDGNIYCLQHALKNLNNGNIQ 2316
Fly 2317 AKQCKLIYAYNVDDIQQLI------------------RQLQEKINHK 2345 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Jarid2 | NP_648324.1 | JmjN | 1740..1781 | CDD:128818 | 21/40 (53%) |
| ARID | 1812..1893 | CDD:279697 | 22/104 (21%) | ||
| JmjC | 2066..2181 | CDD:202224 | 42/114 (37%) | ||
| zf-C5HC2 | 2281..2334 | CDD:280996 | 15/54 (28%) | ||
| Kdm5a | NP_001264106.1 | JmjN | 18..59 | CDD:128818 | 21/40 (53%) |
| ARID | 85..170 | CDD:198082 | 17/85 (20%) | ||
| PHD1_KDM5A | 295..343 | CDD:277075 | 2/47 (4%) | ||
| JmjC | 470..586 | CDD:202224 | 42/115 (37%) | ||
| zf-C5HC2 | 676..728 | CDD:280996 | 15/54 (28%) | ||
| PLU-1 | 741..1070 | CDD:285609 | 4/17 (24%) | ||
| PHD2_KDM5A | 1163..1215 | CDD:277079 | |||
| PHD3_KDM5A | 1608..1659 | CDD:277156 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 1 | 1.000 | 46 | 1.000 | Domainoid score | I11791 |
| eggNOG | 1 | 0.900 | - | - | E1_COG0055 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 1 | 1.010 | - | - | D664180at2759 | |
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 1 | 1.100 | - | - | O | PTHR10694 |
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 6 | 5.920 | |||||