| Sequence 1: | NP_648324.1 | Gene: | Jarid2 / 39103 | FlyBaseID: | FBgn0036004 | Length: | 2351 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001100647.1 | Gene: | Kdm5b / 304809 | RGDID: | 1565602 | Length: | 1544 | Species: | Rattus norvegicus |
| Alignment Length: | 772 | Identity: | 199/772 - (25%) |
|---|---|---|---|
| Similarity: | 307/772 - (39%) | Gaps: | 189/772 - (24%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 1740 EAPIFRPTEKEFADPIEFIERITPIAARFGICKIIPPASFKP--ECRISDEMRFTAYNQYVHKML 1802
Fly 1803 HRWGPSAKELSAIKKYLATQSIVMNHPPWIGGMEVDLPRLYHTVQELGGLKEVIEKKKWARVAEE 1867
Fly 1868 M---------------------------------CI--PKL---AQDRVTKLDDI-YCKYLLPYD 1893
Fly 1894 TLSPAERQKLF-----------DE----------------------------------------- 1906
Fly 1907 VEADWAKREARARRNA---DRFVNTESVSNEEDD--LSSDEDEESEEEI------------DGVS 1954
Fly 1955 MECIVKGRSMPLSQ--FYRIARN-------TMALWFKS--------TDPTVNEVEAEFWRHVAVR 2002
Fly 2003 DSHVCVHSGS-IDSSGWGYGFPSPGPKGKGS----NYARHPWNLKVLTNNSGSVLRSL-GPVMGV 2061
Fly 2062 TVPTLHVGMLFSACCWYRDPHGLSWIEYLHTGASKLWYGIPDDQSANFRAALTSLIPTHCQNKTI 2126
Fly 2127 WLPCDTVMVPPHMLTDRGVSLCRIEQKPGEFIVVFPRAYTSSLATGYVVSESVYFATMSWLDLAK 2191
Fly 2192 ---DDFRDIHESCEPAMFSLEQLLFALG-----YDQRVNSEALHQMLPMLNDVCEKESAAREQLR 2248
Fly 2249 AAGVTSTEKVQAEKGQKAKKQQQPPYKSIESECDLCRANLYISMV--RTEDGNIYCLQHALKNLN 2311
Fly 2312 NGNIQAKQC-----KLIYAYNVDDIQQLIRQLQ---EKINH---------KAAVKKK 2351 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Jarid2 | NP_648324.1 | JmjN | 1740..1781 | CDD:128818 | 21/40 (53%) |
| ARID | 1812..1893 | CDD:279697 | 26/119 (22%) | ||
| JmjC | 2066..2181 | CDD:202224 | 39/114 (34%) | ||
| zf-C5HC2 | 2281..2334 | CDD:280996 | 15/59 (25%) | ||
| Kdm5b | NP_001100647.1 | JmjN | 31..72 | CDD:128818 | 21/40 (53%) |
| BRIGHT | 98..188 | CDD:128777 | 18/90 (20%) | ||
| PHD1_KDM5B | 311..356 | CDD:277076 | 7/44 (16%) | ||
| JmjC | 486..602 | CDD:202224 | 39/115 (34%) | ||
| zf-C5HC2 | 692..744 | CDD:280996 | 15/59 (25%) | ||
| PLU-1 | 757..1086 | CDD:285609 | 3/17 (18%) | ||
| PHD_SF | 1178..1221 | CDD:304600 | |||
| HARE-HTH | <1416..1501 | CDD:294801 | |||
| PHD3_KDM5B | 1486..1535 | CDD:277157 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 1 | 1.000 | 46 | 1.000 | Domainoid score | I11791 |
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 1 | 1.010 | - | - | D664180at2759 | |
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 1 | 1.100 | - | - | O | PTHR10694 |
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 5 | 5.020 | |||||