Sequence 1: | NP_648324.1 | Gene: | Jarid2 / 39103 | FlyBaseID: | FBgn0036004 | Length: | 2351 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_596174.1 | Gene: | lid2 / 2541299 | PomBaseID: | SPBP19A11.06 | Length: | 1513 | Species: | Schizosaccharomyces pombe |
Alignment Length: | 770 | Identity: | 156/770 - (20%) |
---|---|---|---|
Similarity: | 272/770 - (35%) | Gaps: | 217/770 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 1722 KMANNTAFP------RHDDPTQMVEAPIFRPTEKEF---------------ADPIEFIERITPIA 1765
Fly 1766 ARFGICKIIPPASFK-PECRISDEMRFTAYNQYVHKMLHRWGPSAKELSAIKKYLATQSIVMNHP 1829
Fly 1830 PWIGGMEVDLPRLYHTVQELGG---------LKEVI-----EKKKWARVAEEMCIPKLAQDRVTK 1880
Fly 1881 LDDIYCKYLLPYD-TLSPAERQKLFDEVEADWAKREARARRNADRFVNTESVSNEEDDL--SSDE 1942
Fly 1943 DEESEEEIDG---VSMECIVKGR----------------------------------SMPLSQFY 1970
Fly 1971 RIA----------------------------------RNTMALWFKSTDPTVNEVEAEFWRHVAV 2001
Fly 2002 RDSHVC---------VHSGSIDSSGWGYGFPSPG--PKGKGSNYARHPWNL-------KVLTNNS 2048
Fly 2049 GSVLRSLGPVMGVTVPTLHVGMLFSACCWYRDPHGLSWIEYLHTGASKLWYGIPDDQSANFRAAL 2113
Fly 2114 TSLIPTHCQ---NKTIWLPCDTVMVPPHMLTDRGVSLCRIEQKPGEFIVVFPRAYTSSLATGYVV 2175
Fly 2176 SESVYFATMSWL--DLAKDDFRDIHESCEPAMFSLEQLLFA--LGYDQRVNSEALHQMLPMLNDV 2236
Fly 2237 CEKESAAREQLRAAGVTSTEKVQAEKGQKAKKQQQPPYKSIESECDLCRANLYISMVRT-EDGNI 2300
Fly 2301 YCLQHALKNLNNGNIQAKQCKLIYAYNVDDIQ-------QLIRQLQEKINHKAAV 2348 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Jarid2 | NP_648324.1 | JmjN | 1740..1781 | CDD:128818 | 9/56 (16%) |
ARID | 1812..1893 | CDD:279697 | 20/94 (21%) | ||
JmjC | 2066..2181 | CDD:202224 | 35/117 (30%) | ||
zf-C5HC2 | 2281..2334 | CDD:280996 | 11/60 (18%) | ||
lid2 | NP_596174.1 | ARID | 122..208 | CDD:198082 | 20/100 (20%) |
PHD1_Lid2p_like | 270..315 | CDD:276994 | 3/44 (7%) | ||
cupin_like | 441..557 | CDD:304367 | 35/118 (30%) | ||
zf-C5HC2 | 646..697 | CDD:280996 | 11/53 (21%) | ||
PLU-1 | 710..1047 | CDD:285609 | 3/9 (33%) | ||
PHD_Ecm5p_Lid2p_like | 1098..1142 | CDD:276993 | |||
PHD3_Lid2p_like | 1354..1400 | CDD:276995 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG0055 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR10694 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.910 |