DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jarid2 and Uty

DIOPT Version :10

Sequence 1:NP_648324.1 Gene:Jarid2 / 39103 FlyBaseID:FBgn0036004 Length:2351 Species:Drosophila melanogaster
Sequence 2:XP_017174175.1 Gene:Uty / 22290 MGIID:894810 Length:1236 Species:Mus musculus


Alignment Length:625 Identity:118/625 - (18%)
Similarity:189/625 - (30%) Gaps:251/625 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 QGQSAPSSSSSIAYSAAAAAAGSGSGPSTSGADSNQPPIEILPNKCPKPQDFLTFLCFRGTRALP 124
            |.|:.|..    |..|...|.....|.:.:..|     :.||...|.:|||.:.  |        
Mouse   348 QQQNQPMD----ALQAYICAVQLDHGHAAAWMD-----LGILYESCNQPQDAIK--C-------- 393

  Fly   125 AHLDFLNQGKSKDSEASSTGANNNN----NARKPNNSRASLAGNKKKRGRPAKGATKKVDVVAPI 185
                :||..:||  ..::|.|..:.    .|:..|..::||. ||.|       ....::....:
Mouse   394 ----YLNAARSK--SCNNTSALTSRIKFLQAQLCNLPQSSLQ-NKTK-------LLPSIEEAWSL 444

  Fly   186 PDPTEKPS------TAEKPASDKNNLIAA---------------EAPKIPS----RNPTPVLPGA 225
            |.|.|..|      ||::..||..|.:..               .|.|:.|    :.| |...|:
Mouse   445 PIPAELTSRQGAMNTAQQSVSDTWNSVQTASHHSVQQKVYTQCFTAQKLQSFGKDQQP-PFQTGS 508

  Fly   226 VR-KRAEVVTDGNRRG-----ARGRGAGISHDKTTPAA----------LSKDNKRRS--NRASTK 272
            .| .:|....|.|:.|     ...:|...:|....|.:          .|||::.:|  ::.|.|
Mouse   509 TRYLQAASTNDQNQNGNHTLPQNSKGDAQNHFLRIPTSEEQKIINFTKESKDSRSKSLTSKTSRK 573

  Fly   273 E---------------------SKPVIDDDNSEDLDE------------------QEADDDE--- 295
            :                     |.|:...:|.|.:..                  ...|.|.   
Mouse   574 DRDTSNICVNAKKHSNHIYQISSVPISSLNNKESVSPDLIIVDNPQLSVLVGETIDNVDHDIGTC 638

  Fly   296 DEFFSAHDATSRNGEEVKADSPVKAEPTKRGRPSAAKKAVEP--------AP---------EGQT 343
            |:..:.|.|..:..:.:.|.||..|..|:    :.:.|..|.        :|         ||..
Mouse   639 DKVNNVHLAIHKKPDNLSASSPSSAISTE----TLSLKLTEQTHIVTSFISPHSGLHTINGEGHE 699

  Fly   344 VLKDKAPVK---RVRQRESP-----IFIPSPE-------------SSGRMTRQRAFFEPVKVPPH 387
            .|:..|.|.   |.|.:..|     |:..|.|             |:|.:.        :.:.|.
Mouse   700 NLESSASVNVGLRPRSQIIPSMSVSIYSSSTEVLKACRSLGKNGLSNGHIL--------LDICPP 756

  Fly   388 KEEPGAHDPPKDEPKKQPETPPSKTEKEQE----------------------------------P 418
            ...|.:..||..:.|..|.||....|.:::                                  .
Mouse   757 PRPPTSPYPPLPKEKLNPPTPSIYLENKRDAFFPPLHQFCINPKNPVTVIRGLAGALKLDLGLFS 821

  Fly   419 TKQIKEAKEKTNSSIYAKEAKQQL-----ENGD-------------SLHGAVAK----------- 454
            ||.:.||..:     :..|.:.||     ||.|             |.|..:||           
Mouse   822 TKTLVEANNE-----HIVEVRTQLLQPADENWDPSGTKKIWRYENKSSHTTIAKYAQYQACSFQE 881

  Fly   455 -----GKKSLNVFDFSSDDEQPLAKSIKLKKGAKGASPKK 489
                 .::...|.|: ||:|...:.:    .|.:..:|.|
Mouse   882 SLREENERRTQVKDY-SDNESTCSDN----SGRRQKAPFK 916

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jarid2NP_648324.1 PHA03247 <157..429 CDD:223021 77/428 (18%)
Atrophin-1 762..>986 CDD:460830
JmjN 1740..1781 CDD:128818
ARID_JARD2 1804..1915 CDD:350634
cupin_RmlC-like 2066..2181 CDD:477354
zf-C5HC2 2281..2334 CDD:460750
UtyXP_017174175.1 BepA 68..213 CDD:443813
TPR repeat 88..116 CDD:276809
TPR repeat 121..178 CDD:276809
LapB 149..399 CDD:442196 17/73 (23%)
TPR repeat 183..213 CDD:276809
TPR repeat 224..252 CDD:276809
TPR repeat 262..297 CDD:276809
TPR repeat 304..331 CDD:276809
TPR repeat 336..366 CDD:276809 6/21 (29%)
TPR repeat 371..399 CDD:276809 10/46 (22%)
JmjC 935..999 CDD:214721
JmjC 969..1077 CDD:396791
Blue background indicates that the domain is not in the aligned region.

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