Sequence 1: | NP_648324.1 | Gene: | Jarid2 / 39103 | FlyBaseID: | FBgn0036004 | Length: | 2351 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_502032.2 | Gene: | rbr-2 / 177985 | WormBaseID: | WBGene00004319 | Length: | 1477 | Species: | Caenorhabditis elegans |
Alignment Length: | 805 | Identity: | 200/805 - (24%) |
---|---|---|---|
Similarity: | 317/805 - (39%) | Gaps: | 191/805 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 1697 KSRTAAQTSSTAAAVAKKYKDDTPIKMAN--NTAFPRHDDPTQMVE-----------APIFRPTE 1748
Fly 1749 KEFADPIEFIERITPIAARFGICKIIPPASFKPECRISDEMRFTAYNQYVHKMLHRWGPSAKELS 1813
Fly 1814 AIKKYLAT-----------QSIVMNHPPWIGGMEVDLPRLYHTVQELGGLKEVIEKKKWARVAEE 1867
Fly 1868 MCIPK--LA--------------------------QDRVTKLDD--------IYCKYLLPYDTLS 1896
Fly 1897 -----PAERQKLFDEVEADWAKREARAR------RNADRFVNTESVSNE----------EDDLSS 1940
Fly 1941 DED----------EESEEE-------IDGVS----------------------MECIVK------ 1960
Fly 1961 --------GRSMPLSQFYRIARNTMALWFKSTD---PTVNEVEAEFWRHVAVRDSHVCVHSGS-I 2013
Fly 2014 DSSGWGYGFPSPGPKGKG------SNYARHPWNLKVLTNNSGSVLRSLGP-VMGVTVPTLHVGML 2071
Fly 2072 FSACCWYRDPHGLSWIEYLHTGASKLWYGIPDDQSANFRAALTSLIPTHCQNKTIWLPCDTVMVP 2136
Fly 2137 PHMLTDRGVSLCRIEQKPGEFIVVFPRAYTSSLATGYVVSESVYFATMSWLDLAKDDFRDIHESC 2201
Fly 2202 EPAMFSLEQLLF-------ALGYDQRVNSEALHQMLPMLNDVCEKESAAREQLRAAGVTSTEKVQ 2259
Fly 2260 AEKGQKAKKQQQPPYKSIESE---CDLCRANLYI-SMVRTEDGNIYCLQHALKNLNNGNIQAKQC 2320
Fly 2321 KLIYAYNVDDIQQLIRQLQEK-INH 2344 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Jarid2 | NP_648324.1 | JmjN | 1740..1781 | CDD:128818 | 22/51 (43%) |
ARID | 1812..1893 | CDD:279697 | 31/127 (24%) | ||
JmjC | 2066..2181 | CDD:202224 | 37/114 (32%) | ||
zf-C5HC2 | 2281..2334 | CDD:280996 | 11/53 (21%) | ||
rbr-2 | NP_502032.2 | JmjN | 55..96 | CDD:128818 | 22/40 (55%) |
BRIGHT | 122..214 | CDD:128777 | 24/92 (26%) | ||
PHD_SF | 321..368 | CDD:304600 | 5/46 (11%) | ||
JmjC | 501..617 | CDD:202224 | 37/115 (32%) | ||
zf-C5HC2 | 709..761 | CDD:280996 | 11/53 (21%) | ||
PLU-1 | 788..1130 | CDD:285609 | |||
PHD | 1208..1254 | CDD:214584 | |||
PHD3_KDM5A_like | 1413..1463 | CDD:277083 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 46 | 1.000 | Domainoid score | I8226 |
eggNOG | 1 | 0.900 | - | - | E1_COG0055 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D664180at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR10694 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
6 | 5.920 |