Protein Alignment Jarid2 and atp-2

DIOPT Version :10

• Sequence 1: NP_648324.1
• Gene: Jarid2 / 39103
• FlyBaseID: FBgn0036004
• Length: 2351
• Species: Drosophila melanogaster
• Sequence 2: NP_498111.2
• Gene: atp-2 / 175716
• WormBaseID: WBGene00000229
• Length: 538
• Species: Caenorhabditis elegans
• Alignment Length: 223
• Identity: 44/223 - (19%)
• Similarity: 72/223 - (32%)
• Gaps: 52/223 - (23%)

  Fly  1015 RSPLPRSSTSSFPSPSPVKFQPTSGTTATTVGTPSSATKSPLAPPPPSPPVSQVVIQTSSLNLSM 1079
            |||......|.....:.|:.....||.....|.|.:.|..|:..|          :...:|...|
 Worm   100 RSPRLILEVSQHLGDNVVRCIAMDGTEGLVRGQPVADTGDPIKIP----------VGPETLGRIM 154

  Fly  1080 SIAATVNAAPMPVASTSAAAAH-------QTTVATTVTATS------TPPPAHSNSAATGGGAGA 1131
            ::.........|:||.:.||.|       :.:|...:..|.      ..|.|........||||.
 Worm   155 NVIGEPIDERGPIASKNFAAIHAEAPEFVEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGV 219

  Fly  1132 NSDPLKDEIGSILAQATLMPSKEESGKIFGIASVSLAQSSGPDNTKCTLGKCGSIHKPVLGPVVP 1196
            ....|..|:.:.:|:|        .|.....|.|......|.|          ..|:.:.|.|:.
 Worm   220 GKTVLIMELINNVAKA--------HGGYSVFAGVGERTREGND----------LYHEMIEGGVID 266

  Fly  1197 TEGYFGDQLSSKERRKAKVNMTHEQIQK 1224
            .:|           :.:||::.:.|:.:
 Worm   267 LKG-----------KNSKVSLVYGQMNE 283

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Jarid2	NP_648324.1	PHA03247	<157..429	CDD:223021
		Atrophin-1	762..>986	CDD:460830
		JmjN	1740..1781	CDD:128818
		ARID_JARD2	1804..1915	CDD:350634
		cupin_RmlC-like	2066..2181	CDD:477354
		zf-C5HC2	2281..2334	CDD:460750
atp-2	NP_498111.2	AtpD	65..535	CDD:439825	44/223 (20%)