Sequence 1: | NP_648324.1 | Gene: | Jarid2 / 39103 | FlyBaseID: | FBgn0036004 | Length: | 2351 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_001345885.4 | Gene: | jarid2a / 100007426 | ZFINID: | ZDB-GENE-061218-1 | Length: | 1171 | Species: | Danio rerio |
Alignment Length: | 1189 | Identity: | 329/1189 - (27%) |
---|---|---|---|
Similarity: | 535/1189 - (44%) | Gaps: | 236/1189 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 1263 KELSASFSSSSKNTRGDLGKSESAWSAKGP-SLKATPVLV------TPPNRKELHEQADSKDCDA 1320
Fly 1321 LDY----DKSSTPVNLTQKITSNESLAVEKKVNDRKGKESAKAAASKAATQPRSTAATPPTPISS 1381
Fly 1382 TPTPASLTPSKSSPTPPPAVKQKAEKGKRNATAGG----GATALASPPAAPTPANPK----RTPV 1438
Fly 1439 --------YNQKNAKAQQQQAETKPASNPPSGAGTKRESVYAFGKDDESGSKSGNRRRTDPS-PV 1494
Fly 1495 PAP---------ALVPNA---LSERSPTKKRA-----AAAAAATAVQLTLSPTENCKIEGKPSKA 1542
Fly 1543 PTGRGAKKQQQQAPAPPAPPVEASGDSDAEGATFYIPLQGAGVGGSGDGGIQGVAVKLGREGPDG 1607
Fly 1608 PNQKVVMQATLVTKAQMDTNSKP------LPESLNTNELVKT-LLHAASNDAASTTTSLKSLPKA 1665
Fly 1666 STSAAAGAAAAPGASSLVRVNSNSSLFSGSAKSRTAAQTSSTAAAVAKKYKDDTPIKMANNTAFP 1730
Fly 1731 RHDDPTQMVEAPIFRPTEKEFADPIEFIERITPIAARFGICKIIPPASFKPECRISDEMRFTAYN 1795
Fly 1796 QYVHKMLHRWGPSAKELSAIKKYLATQSIVMNHPPWIGGMEVDLPRLYHTVQELGGLKEVIEKKK 1860
Fly 1861 WARVAEEMCIPKLAQDRVTKLDDIYCKYLLPYDTLSPAERQKLFDEVEADWAKREARARRNAD-- 1923
Fly 1924 ------------------------------------RFVNTESVSNEEDDLSSDEDEE---SEEE 1949
Fly 1950 IDGVSMECIVKGRSMPLSQFYRIARNTMALWFKSTDPTVNEVEAEFWRHVAVRDSHVCVHSGSID 2014
Fly 2015 SSGWGYGFPSPGPKGKGSNYARHPWNLKVLTNNSGSVLRSLGPVMGVTVPTLHVGMLFSACCWYR 2079
Fly 2080 DPHGLSWIEYLHTGASKLWYGIPDDQSANFRAALTSLIPTHCQNKTIWLPC--DTVMVPPHMLTD 2142
Fly 2143 RGVSLCRIEQKPGEFIVVFPRAYTSSLATGYVVSESVYFATMSWLDLAKDDFRDIHESCEPAMFS 2207
Fly 2208 LEQLLFALGYDQRVNSEALHQMLPMLNDVCEKESAAREQLRAAGVTSTEK--VQAEKGQKAKKQQ 2270
Fly 2271 QPPY--KSIESECDLCRANLYISMVRTEDGN-IYCLQHALKNLNNGNIQAKQCKLIYAYNVDDIQ 2332
Fly 2333 QLIRQLQEKINHKAAVKKK 2351 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Jarid2 | NP_648324.1 | JmjN | 1740..1781 | CDD:128818 | 16/40 (40%) |
ARID | 1812..1893 | CDD:279697 | 37/80 (46%) | ||
JmjC | 2066..2181 | CDD:202224 | 42/116 (36%) | ||
zf-C5HC2 | 2281..2334 | CDD:280996 | 14/53 (26%) | ||
jarid2a | XP_001345885.4 | JmjN | 501..542 | CDD:301729 | 16/40 (40%) |
ARID | 568..654 | CDD:198082 | 38/85 (45%) | ||
JmjC | 853..968 | CDD:202224 | 42/117 (36%) | ||
zf-C5HC2 | 1072..1125 | CDD:280996 | 14/53 (26%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C170573984 | |
Domainoid | 1 | 1.000 | 122 | 1.000 | Domainoid score | I5600 |
eggNOG | 1 | 0.900 | - | - | E1_COG0055 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 465 | 1.000 | Inparanoid score | I1517 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D664180at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0007182 | |
OrthoInspector | 1 | 1.000 | - | - | otm24408 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_109452 | |
Panther | 1 | 1.100 | - | - | O | PTHR10694 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R6120 |
SonicParanoid | 1 | 1.000 | - | - | X5293 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
14 | 13.790 |