DRSC/TRiP Functional Genomics Resources

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Protein Alignment Uch-L5 and Bap1

DIOPT Version :9

Sequence 1:NP_001261632.1 Gene:Uch-L5 / 39102 FlyBaseID:FBgn0011327 Length:324 Species:Drosophila melanogaster
Sequence 2:NP_001100762.1 Gene:Bap1 / 306257 RGDID:1311938 Length:740 Species:Rattus norvegicus


Alignment Length:287 Identity:108/287 - (37%)
Similarity:157/287 - (54%) Gaps:47/287 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 WCLIESDPGVFTELIREF-------------GCDGAQVEEIWSLDSESFKNLEPIHGLIFLFKWV 59
            |..:|||||:||.|:.:|             |..|.|||||:.|.|   |...|::|.||||||:
  Rat     5 WLELESDPGLFTLLVEDFGKNPFTPDRRALAGVKGVQVEEIYDLQS---KCQGPVYGFIFLFKWI 66

  Fly    60 QEDEPAGKV--------VLDRE---NIFFAKQVINNACATQAILSLLMNLDHEDIKLGETLTNFK 113
            :|.....||        |:|.:   ::|||.|:|.|:|||.|:||:|:|..:.|  ||.||:..|
  Rat    67 EERRSRRKVSTLVDDTSVIDDDIVNSMFFAHQLIPNSCATHALLSVLLNCSNVD--LGPTLSRMK 129

  Fly   114 EFCQCFDPYNKGLTLSNASQIRTVHNSFARPTLFELDTK----NQKKDDDVYHFVGYMPIGGRLY 174
            :|.:.|.|.:||..:.||.::...|||.|||....|..|    :..:..:.:|||.|:||.|||:
  Rat   130 DFTKGFSPESKGYAIGNAPELAKAHNSHARPEPRHLPEKQNGLSAVRTMEAFHFVSYVPITGRLF 194

  Fly   175 ELDGLREGPIDLGEIKSEQNWIDVVRPIIEKRMQRYSDGE----IHFNLMALISDRQRIYEQQIE 235
            |||||:..|||.|....::.|.|..|.:|.:|:...:.||    |.|||||::.||:..||.::.
  Rat   195 ELDGLKVYPIDHGPWGEDEEWTDKARRVIMERIGLATAGEPYHDIRFNLMAVVPDRRVKYEARLH 259

  Fly   236 KLLNPAPNAMDTEEDRQAEISSLRTYI 262
            .|          :.:||..:.:|:..|
  Rat   260 VL----------KGNRQTVLEALQQLI 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Uch-L5NP_001261632.1 Peptidase_C12_UCH37_BAP1 8..222 CDD:187738 98/245 (40%)
Bap1NP_001100762.1 Peptidase_C12_UCH37_BAP1 5..246 CDD:187738 98/245 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 286..364
HBM-like motif. /evidence=ECO:0000250|UniProtKB:Q92560 376..379
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 385..448
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 475..535
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 586..635
Interaction with BRCA1. /evidence=ECO:0000250 607..732
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 715..740
Nuclear localization signal. /evidence=ECO:0000250|UniProtKB:Q92560 728..733
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2778
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1363547at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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