Sequence 1: | NP_001098676.2 | Gene: | LAMA4 / 3910 | HGNCID: | 6484 | Length: | 1823 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_723870.1 | Gene: | wb / 43946 | FlyBaseID: | FBgn0261563 | Length: | 3375 | Species: | Drosophila melanogaster |
Alignment Length: | 1938 | Identity: | 462/1938 - (23%) |
---|---|---|---|
Similarity: | 760/1938 - (39%) | Gaps: | 459/1938 - (23%) |
- Green bases have known domain annotations that are detailed below.
Human 71 FFHTLSGECVPCDCNGNSNECLDGSGYCVHCQRNTTGEHCEKCLDGYIGDSIRGAPQFCQPCPCP 135
Human 136 LPHLANFAESCYRKNGAVRCICNENYAGPNCERCAPGYYGNPLLI-GSTCKKCDCSGNSDPNLIF 199
Human 200 EDCDEVTGQCRNCLRNTTGFKCERC-APGYYGDARIAKNCAVCNCGGGPCDSVTGECLEEGFEPP 263
Human 264 TGMDCPTISCDKCVWDLTDDLRLAALSIEEGKSGVLSVSSGAAAHRHVNEINATIYLLKTKLSER 328
Human 329 ENQY------------ALRKIQINNAENTMKSLLSDVEELVEKENQASRKG-QLVQKESMDTINH 380
Human 381 ASQLVEQAHD---MRDKIQEINNKMLYYGEE-HELS-PKEISEKLVLAQ------KMLEEIRSR- 433
Human 434 ----QPFFTQRELVDEEADEA--YELLSQAESWQRLHNETRTLFPVVLEQLDDYNAKLSDLQEAL 492
Human 493 DQALNYVRDAED-MNRATAARQRDHEKQQERVREQMEVVNMSLSTSADSLTTP----------RL 546
Human 547 TLSELDDIIKNASGIYAEIDGAK----SELQVKLSNLSNLSHDLVQEAIDHAQDLQQEANELSRK 607
Human 608 LHSSDMNGLVQKALDASNVYENIVNYVSEANETAEFALNTTDRIYDAVSGIDTQIIYHKDES--- 669
Human 670 ---ENLLNQARELQAKA--ESSSDEAVADTSRR----VGG--ALARKSALKTRLSDAVKQLQAAE 723
Human 724 RGDAQQRLGQSRLITEEANRT----------TMEVQQATAPMANNLTN----WSQNLQHFDSSAY 774
Human 775 NTAVNSARDAVRNLTEVVPQLLDQLRTVEQKRPA---SNVSASIQRIRELIAQTRSVASKIQVSM 836
Human 837 MFDGQSAVEVHSRTSMDDLKAFTSLSLYMKPPVKRPELTETADQFILYLGSKNAKKEYMGLAIKN 901
Human 902 DNLVYVYNLG--TKDVEIPL-----DSKPVSSWPAYFSIVKIERVGKHGKVFLTVPSLSSTAEEK 959
Human 960 FIKKGEFSGDDSLL---DLDPEDTVFY--------VGGVPSNFKLPTSLNLPGFVGCLELATLNN 1013
Human 1014 DVISLYNFKHIYNMDPSTSVPCARDKLAFTQSRAAS--YFFDGSGYAVVRDI----TRRGKFGQV 1072
Human 1073 TRFDIEVRTPADNGLILLMVN-------------GSMFFRLEMRNGYLHVFYDFGFSGGPVHLED 1124
Human 1125 TLKKAQINDAKYH------------EISIIYHNDKKMILVVDRRHVKSMDNEKMKIPF------T 1171
Human 1172 DIYIGGAPPEILQ--SRALRAHLPLDINFRGCMKGFQFQKKDFNLLEQTETLGVGYGCPEDSLIS 1234
Human 1235 RRAYFNGQSFI----ASIQKISFFDGFEGGFNFRTLQPNGLLFYYASGSDV------------FS 1283
Human 1284 ISLDNGTVIMDVKG----IKVQSVDKQYNDGLSHFVISSVSPTRYELIVD----KSRVGSKNPTK 1340
Human 1341 GKIEQTQASEKKFYFGG-------SPISAQYANFTGCISNAYFTRVDRDVEVEDFQRYTE----- 1393
Human 1394 ------KVHTSLYECPIESSPLFLLHKKGKNLSKPKASQNKKGGKSKDAPSWDPVA--------- 1443
Human 1444 ---LKLPERNTPRNSHCHLSNSPRAIEHAYQYGGTANSRQEFEHLKGDFGAKSQFSIRLRTRSSH 1505
Human 1506 GMIFYV--SDQEENDFMTLFLAHGRLVYMFNVGHKKLKIRSQEKYNDGLWHDV-IFIRERSSGRL 1567
Human 1568 VIDGLRVLEESLPPTEATWKIKGPI------YLGGV--APGKAVKNVQINSIYSFSGCLSNLQLN 1624
Human 1625 G--ASITSASQTFSVTPCFEGPMETGTYFSTEGGYVVLDESFNIGLKFEIAFEVRPRSSSGTLVH 1687
Human 1688 GHSVNG-EYLNVHMKNGQVIVKVNNG----IRDFSTSVTPKQSLCDGRWHRITVIRDSNVVQLDV 1747
Human 1748 DS--EVNHVVGPLNPKPIDHREPVFVGGVPESLLTPRLAPSKPFTGCIRHFVI 1798 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LAMA4 | NP_001098676.2 | EGF_Lam | 81..130 | CDD:238012 | 20/48 (42%) |
EGF_Lam | 131..185 | CDD:238012 | 23/54 (43%) | ||
EGF_Lam | 187..238 | CDD:238012 | 15/51 (29%) | ||
Laminin_I | 296..554 | CDD:283627 | 60/299 (20%) | ||
SPEC | 339..531 | CDD:295325 | 43/211 (20%) | ||
COG1340 | 426..724 | CDD:224259 | 76/333 (23%) | ||
Prefoldin | 510..609 | CDD:298833 | 27/112 (24%) | ||
Laminin_II | 734..861 | CDD:283628 | 30/143 (21%) | ||
LamG | 835..1012 | CDD:238058 | 37/194 (19%) | ||
LamG | 1049..1207 | CDD:238058 | 46/196 (23%) | ||
LamG | 1237..1376 | CDD:238058 | 46/169 (27%) | ||
LamG | 1492..1624 | CDD:238058 | 33/142 (23%) | ||
LamG | 1648..1799 | CDD:238058 | 49/158 (31%) | ||
wb | NP_723870.1 | Laminin_N | 164..396 | CDD:278484 | |
EGF_Lam | 401..450 | CDD:238012 | |||
TNFRSF | <407..507 | CDD:304602 | |||
EGF_Lam | 505..552 | CDD:238012 | |||
Laminin_EGF | 550..597 | CDD:278482 | |||
Laminin_B | 660..798 | CDD:278481 | |||
EGF_Lam | 851..900 | CDD:238012 | |||
Laminin_EGF | <943..971 | CDD:278482 | |||
VSP | 953..1414 | CDD:146106 | |||
Laminin_EGF | 974..1018 | CDD:278482 | |||
EGF_Lam | 1017..1065 | CDD:238012 | |||
Laminin_EGF | 1065..>1105 | CDD:278482 | |||
EGF_Lam | 1150..1197 | CDD:238012 | |||
Laminin_EGF | 1199..1247 | CDD:278482 | |||
EGF_Lam | 1247..1292 | CDD:238012 | |||
Laminin_EGF | 1294..1342 | CDD:278482 | |||
Laminin_EGF | 1340..1392 | CDD:278482 | |||
Laminin_B | 1486..1611 | CDD:278481 | |||
EGF_Lam | 1669..1716 | CDD:238012 | 20/48 (42%) | ||
Laminin_EGF | 1718..1767 | CDD:278482 | 22/49 (45%) | ||
EGF_Lam | 1772..1819 | CDD:238012 | 15/53 (28%) | ||
CrfC | <1933..2267 | CDD:223771 | 85/378 (22%) | ||
Laminin_II | 2277..2400 | CDD:283628 | 28/135 (21%) | ||
LamG | 2399..>2492 | CDD:304605 | 22/108 (20%) | ||
Laminin_G_2 | 2616..2755 | CDD:280389 | 38/167 (23%) | ||
Laminin_G_2 | 2804..2944 | CDD:280389 | 41/144 (28%) | ||
Laminin_G_2 | 3038..3169 | CDD:280389 | 35/147 (24%) | ||
LamG | 3192..3347 | CDD:238058 | 48/156 (31%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1836 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100395 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.670 |