DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3434 and QTRT1

DIOPT Version :10

Sequence 1:NP_648320.1 Gene:CG3434 / 39098 FlyBaseID:FBgn0036000 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_112486.1 Gene:QTRT1 / 81890 HGNCID:23797 Length:403 Species:Homo sapiens


Alignment Length:432 Identity:95/432 - (21%)
Similarity:168/432 - (38%) Gaps:78/432 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 IESISKNSGRLGQLRIRDGGPEFKTPLLL-----QTTKGGSIPWLSA--------DVFETHVSRK 56
            :...|::..|.|:|.:..|  ...||:.:     .|.||.:...|.|        :.:...:...
Human    20 VAECSRSRARAGELWLPHG--TVATPVFMPVGTQATMKGITTEQLDALGCRICLGNTYHLGLRPG 82

  Fly    57 PQVLQFTLSTMEQMTEALTHWNSGGGRGLSDYVGLP-------GHLNILLLRDPCETTPSGGNDR 114
            |:::|                   ...||..::..|       |...::.|....|.|..|...|
Human    83 PELIQ-------------------KANGLHGFMNWPHNLLTDSGGFQMVSLVSLSEVTEEGVRFR 128

  Fly   115 DILPLFTRRGKES-LSSERYMEIVASFKPDMYEGLCDADTNLESAKKRVQKSVDRTEKFM-QYIY 177
            .     ...|.|: ||.|:.::|..:...|:...|.|..::..:. .||::::.|:.::: :.|.
Human   129 S-----PYDGNETLLSPEKSVQIQNALGSDIIMQLDDVVSSTVTG-PRVEEAMYRSIRWLDRCIA 187

  Fly   178 EHRGKVNSTLLAPIVGGYNTFARTQSIKH--AREQPAGSYGGYIFEGFHANGLSATTLDTSKLLP 240
            .|:......|.|.|.||.:...|...::.  .|:.|          ||...|||... ..|:...
Human   188 AHQRPDKQNLFAIIQGGLDADLRATCLEEMTKRDVP----------GFAIGGLSGGE-SKSQFWR 241

  Fly   241 IVEHCVKQLEEDKPKILPGAYTPLTVLELIQQGIDVFDTSYAYCASLNFKALSFSFVQDAVEHVP 305
            :|.....:|.:|||:.|.|......::..:..|.|:||..:....:....||           ||
Human   242 MVALSTSRLPKDKPRYLMGVGYATDLVVCVALGCDMFDCVFPTRTARFGSAL-----------VP 295

  Fly   306 F--LDITDEAIKEDFTPPLSNCNCLTCQKHTRAYLHHLYKTNELLGPILLMVHNLYHYMAFFEKI 368
            .  |.:..:..::||.|....|.|.|||||:||:||.|..::.......|.|||:.:.:.....:
Human   296 TGNLQLRKKVFEKDFGPIDPECTCPTCQKHSRAFLHALLHSDNTAALHHLTVHNIAYQLQLMSAV 360

  Fly   369 RESVAKDTLPQLTELVRNQNGKTQVDYSIAANTKVISKATMG 410
            |.|:.:...|   :.||:..|....|.::.......:.|::|
Human   361 RTSIVEKRFP---DFVRDFMGAMYGDPTLCPTWATDALASVG 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3434NP_648320.1 TGT 13..382 CDD:460299 88/394 (22%)
QTRT1NP_112486.1 TGT 26..381 CDD:460299 91/406 (22%)
RNA binding. /evidence=ECO:0000255|HAMAP-Rule:MF_03218 260..266 1/5 (20%)
RNA binding, important for wobble base 34 recognition. /evidence=ECO:0000255|HAMAP-Rule:MF_03218 284..288 0/3 (0%)

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