DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3552 and VTC5

DIOPT Version :10

Sequence 1:NP_648319.1 Gene:CG3552 / 39097 FlyBaseID:FBgn0035999 Length:408 Species:Drosophila melanogaster
Sequence 2:NP_200323.1 Gene:VTC5 / 835603 AraportID:AT5G55120 Length:431 Species:Arabidopsis thaliana


Alignment Length:365 Identity:90/365 - (24%)
Similarity:147/365 - (40%) Gaps:77/365 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 LPLVVLRSADCRQKEDQEVKRPVRRRTMSKVKYETSL-----EGRAQLYLNAMKVRWDQLHKVPG 99
            |||...::.|          :.|...|.|.|.:..||     |.|.|                .|
plant    41 LPLYTCKNLD----------KSVGENTESPVTFLESLVIGEWEDRFQ----------------RG 79

  Fly   100 LFSYQLEKSPQSRKIPGYWGFYAELNSDRNRKRRRPQ-TIESLNPTFKHMMFNFNKVDAQEVIM- 162
            ||.|.: .:.:::.|||.:||.|:||..|:.|:|..: .::.:...|....|||.||..:|::. 
plant    80 LFRYDV-TACETKVIPGKYGFIAQLNEGRHLKKRPTEFRVDKVLQPFDGNKFNFTKVGQEELLFQ 143

  Fly   163 ----TID-------------DAHGSPEVQMIINKSPITKYHTLICPEVGKNHTQRITRDALQFCI 210
                |.|             ||..||.| :.||.|||...|.|:.|.|.....|||...:|...:
plant   144 FKASTNDDDSEIQFLASMPLDADNSPSV-VAINVSPIEYGHVLLIPRVLDCLPQRIDHKSLLLAL 207

  Fly   211 TFMRNIDDKDMRMGYNSPGALASVNHLHFHLLHMPQDLYID---HVPLDELAGGYVYRLSRRAPT 272
            ......|:...|:||||.||.|::|||||...::.....|:   .:.:.....|.........|.
plant   208 QMAAEADNPYFRLGYNSLGAFATINHLHFQAYYLAMQFPIEKASSLKITTTNNGVKISKLLNYPV 272

  Fly   273 EGICIVFNENDSDEQVAEKVDQLYMLAMWMCKNNMPHNLFLTQDRRPGKSGNIKVFVFARSEYCV 337
            .|:.:     :....:.:..|.:...::.:..||:|.|:.::..   ||    ::|:..:. |..
plant   273 RGLLV-----EGGNTIKDLADTVSDASVCLQNNNIPFNILISDS---GK----RIFLLPQC-YAE 324

  Fly   338 NKDLAE---------FNVGFCELAGYIPLPDADKMENLTE 368
            .:.|.|         .|....|::|::.|...:..|..:|
plant   325 KQALGEVSSTLLDTQVNPAVWEMSGHMVLKRKEDYEGASE 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3552NP_648319.1 PLN03103 <99..368 CDD:215577 76/299 (25%)
VTC5NP_200323.1 PLN03103 2..391 CDD:215577 90/365 (25%)

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