DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3552 and VTC2

DIOPT Version :10

Sequence 1:NP_648319.1 Gene:CG3552 / 39097 FlyBaseID:FBgn0035999 Length:408 Species:Drosophila melanogaster
Sequence 2:NP_567759.1 Gene:VTC2 / 828792 AraportID:AT4G26850 Length:442 Species:Arabidopsis thaliana


Alignment Length:315 Identity:79/315 - (25%)
Similarity:133/315 - (42%) Gaps:77/315 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 GLFSYQLEKSPQSRKIPGYWGFYAELNSDRNRKRRRPQ-TIESLNPTFKHMMFNFNKVDAQEVIM 162
            |||.|.: .:.:::.|||.:||.|:||..|:.|:|..: .::.:..:|....|||.||..:|::.
plant    85 GLFRYDV-TACETKVIPGKYGFVAQLNEGRHLKKRPTEFRVDKVLQSFDGSKFNFTKVGQEELLF 148

  Fly   163 TID---------------DAHGSPEVQMIINKSPITKYHTLICPEVGKNHTQRITRDALQFCITF 212
            ..:               |...||.| :.||.|||...|.|:.|.|.....|||...:|...:..
plant   149 QFEAGEDAQVQFFPCMPIDPENSPSV-VAINVSPIEYGHVLLIPRVLDCLPQRIDHKSLLLAVHM 212

  Fly   213 MRNIDDKDMRMGYNSPGALASVNHLHF--HLLHMPQDLYIDHVPLDELAGGYVYRLSRRAPTEGI 275
            .....:...|:||||.||.|::|||||  :.|.||       .||:            :|||:.|
plant   213 AAEAANPYFRLGYNSLGAFATINHLHFQAYYLAMP-------FPLE------------KAPTKKI 258

  Fly   276 ------------------CIVFNENDSDEQVAEKVDQLYMLAMWMCKNNMPHNLFLTQDRRPGKS 322
                              .::|....|.:::::.|..   ..:.:..||:|.|:.::...|    
plant   259 TTTVSGVKISELLSYPVRSLLFEGGSSMQELSDTVSD---CCVCLQNNNIPFNILISDCGR---- 316

  Fly   323 GNIKVFVFARSEYCVNKDLAE---------FNVGFCELAGYIPLPDADKMENLTE 368
               ::|:..:. |...:.|.|         .|....|::|::.|...:..|..:|
plant   317 ---QIFLMPQC-YAEKQALGEVSPEVLETQVNPAVWEISGHMVLKRKEDYEGASE 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3552NP_648319.1 PLN03103 <99..368 CDD:215577 78/313 (25%)
VTC2NP_567759.1 PLN03103 1..394 CDD:215577 79/315 (25%)

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