DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3552 and gdpgp1

DIOPT Version :10

Sequence 1:NP_648319.1 Gene:CG3552 / 39097 FlyBaseID:FBgn0035999 Length:408 Species:Drosophila melanogaster
Sequence 2:NP_001072398.1 Gene:gdpgp1 / 779852 XenbaseID:XB-GENE-5867391 Length:399 Species:Xenopus tropicalis


Alignment Length:332 Identity:88/332 - (26%)
Similarity:157/332 - (47%) Gaps:53/332 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 AMKVRWDQLHKVPGLFSYQLEKSPQSRKIPGYWGFYAELNSDRNRKRRRPQTIESLNPTFKHMMF 150
            |::.:|::... .|||.|.| ::.|::.:||...:.|:||..|:..||:|:.|.|:...|....|
 Frog    49 ALQSKWEEKMN-EGLFRYPL-RNVQTKILPGSVSYVAQLNIQRSINRRKPEDIWSVQQKFNPNQF 111

  Fly   151 NFNKVDAQEVIMTI--------DDAH----------GSPEVQ-------------------MIIN 178
            |:||:.::|::..:        .|:|          ||.|.:                   ::||
 Frog   112 NYNKIKSEEIVFQMIRSEAEHSVDSHIVQGSMVNGMGSSECKSGSTPQGSCTLECKSSCTLVVIN 176

  Fly   179 KSPITKYHTLICPEVGKNHTQRITRDALQFCITFMRNIDDKDMRMGYNSPGALASVNHLHFHLLH 243
            .||:...|.|..|:......|.:|.:.:.|.:..:........|:|:||.|..|||||||.|..:
 Frog   177 VSPLEFGHVLFMPDPSLCLPQILTENLMLFGMESVFLSSHPGFRVGFNSLGGFASVNHLHLHGFY 241

  Fly   244 MPQDLYIDHVPLDELAGGYVYRLSRRAPTEGICIVFNENDSDEQVAEKVDQL--YMLAMWMCKNN 306
            :..:|.|:......|.....:.|....|..|. :.:.:....:..|:|:.::  :::|     .|
 Frog   242 LDHELLIESSCSKPLCPEINFHLVTHFPAPGF-LFYTDGKDLKSTAQKICKVTDFLVA-----KN 300

  Fly   307 MPHNLFLTQDRRP--GK----SGNIKVFVFARSEYCVNKDLAEFNVGFCELAGYIPLPDADKMEN 365
            :.||||:|:...|  ||    ...|:|.::||......|:::.|||..|||||::|:.:.:...:
 Frog   301 IAHNLFVTRGSNPDTGKVSEDRNGIRVIIWARKPSFGAKEVSAFNVALCELAGHLPVKNQEDFIS 365

  Fly   366 LTELQVL 372
            :||..|:
 Frog   366 ITEDSVI 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3552NP_648319.1 PLN03103 <99..368 CDD:215577 83/313 (27%)
gdpgp1NP_001072398.1 PLN03103 44..388 CDD:215577 88/332 (27%)

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