DRSC/TRiP Functional Genomics Resources

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Protein Alignment phol and YY1

DIOPT Version :10

Sequence 1:NP_648317.1 Gene:phol / 39095 FlyBaseID:FBgn0035997 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_849323.1 Gene:YY1 / 826093 AraportID:AT4G06634 Length:387 Species:Arabidopsis thaliana


Alignment Length:67 Identity:22/67 - (32%)
Similarity:30/67 - (44%) Gaps:12/67 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   546 PTEFMANTMVEREFVECTSSVIQALDLFRKLYPDHRKKEINRS--IEKAVQFIQ--DNQTPDGSW 606
            ||  .|| |....|| |||    ...:.|.|.|.||.|.|:.:  .::.::|:|  .|......|
plant    37 PT--YAN-MTTGAFV-CTS----CSGILRGLNPPHRVKSISMTTFTQQEIEFLQKHGNDVCKQIW 93

  Fly   607 YG 608
            .|
plant    94 LG 95

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pholNP_648317.1 COG5048 <504..614 CDD:227381 22/67 (33%)
C2H2 Zn finger 504..526 CDD:275368
C2H2 Zn finger 533..553 CDD:275368 3/6 (50%)
C2H2 Zn finger 561..583 CDD:275368 8/21 (38%)
C2H2 Zn finger 591..613 CDD:275368 5/20 (25%)
YY1NP_849323.1 C2H2 Zn finger 84..103 CDD:275368 3/12 (25%)
COG5048 <92..170 CDD:227381 2/4 (50%)
C2H2 Zn finger 110..132 CDD:275368
C2H2 Zn finger 140..162 CDD:275368
C2H2 Zn finger 170..189 CDD:275368
SFP1 <196..274 CDD:227516
C2H2 Zn finger 232..252 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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