DRSC/TRiP Functional Genomics Resources

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Protein Alignment phol and ci

DIOPT Version :10

Sequence 1:NP_648317.1 Gene:phol / 39095 FlyBaseID:FBgn0035997 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_524617.3 Gene:ci / 43767 FlyBaseID:FBgn0004859 Length:1397 Species:Drosophila melanogaster


Alignment Length:384 Identity:83/384 - (21%)
Similarity:131/384 - (34%) Gaps:110/384 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   354 LSEQLIYAENQLEEAYGNIELIENMPNNVELIQTPGPGPATVSVALSKVNGCVPNPQPALPKLVL 418
            :|.:...:.:...:::....:|...||::..|.....|.:..|.:...::....||...:....|
  Fly   211 ISRKRALSSSPYSDSFDINSMIRFSPNSLATIMNGSRGSSAASGSYGHISATALNPMSHVHSTRL 275

  Fly   419 QNSSTNVRLKSAGNQSKVTKRQLTAAA--------------------------QVAT-PN----- 451
            |....::...|||..:.:|.:|:.|:.                          |:.| |.     
  Fly   276 QQIQAHLLRASAGLLNPMTPQQVAASGFSIGHMPTSASLRVNDVHPNLSDSHIQITTSPTVTKDV 340

  Fly   452 ---------------------------PPPPLVASSNPARPQRPTIVTKLPTAVANQTAGNAMGA 489
                                       |..|...|...|:.:..:..::|.....|....|..|.
  Fly   341 SQVPAAAFSLKNLDDAREKKGPFKDVVPEQPSSTSGGVAQVEADSASSQLSDRCYNNVVNNITGI 405

  Fly   490 AG-------------------AAGEED----------EEP----KFRCTHRGCNKEFRNHSAMRK 521
            .|                   .:.|.|          :||    :..|..|.|..||.....:.|
  Fly   406 PGDVKVNSRLDEYINCGSISIPSNEYDCANADTTDIKDEPGDFIETNCHWRSCRIEFITQDELVK 470

  Fly   522 HMHTHGPRGHV-------------CNVCGKSFVESSKLKRHQLVHTGEKPFECTFEGCGKRFSLD 573
            |::    ..|:             |....|.|.....|..|...||||||.:||||||.|.:|..
  Fly   471 HIN----NDHIQTNKKAFVCRWEDCTRGEKPFKAQYMLVVHMRRHTGEKPHKCTFEGCFKAYSRL 531

  Fly   574 FNLRTHVRIHTGDRPYHCPIDGCSKCFAQSTNLKSHM-LTHTKPKRKWPRAPQVSNNKT 631
            .||:||:|.|||::||.|...||||.|:.:::...|. .||:..|....:||..:...|
  Fly   532 ENLKTHLRSHTGEKPYTCEYPGCSKAFSNASDRAKHQNRTHSNEKPYICKAPGCTKRYT 590

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pholNP_648317.1 COG5048 <504..614 CDD:227381 45/123 (37%)
C2H2 Zn finger 504..526 CDD:275368 7/21 (33%)
C2H2 Zn finger 533..553 CDD:275368 5/19 (26%)
C2H2 Zn finger 561..583 CDD:275368 13/21 (62%)
C2H2 Zn finger 591..613 CDD:275368 7/22 (32%)
ciNP_524617.3 zf-H2C2_2 503..>521 CDD:463886 9/17 (53%)
SFP1 <513..603 CDD:227516 35/78 (45%)
C2H2 Zn finger 519..541 CDD:275368 13/21 (62%)
zf-H2C2_2 533..560 CDD:463886 16/26 (62%)
C2H2 Zn finger 549..572 CDD:275368 7/22 (32%)
C2H2 Zn finger 580..601 CDD:275368 3/11 (27%)

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