DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment phol and yy1b

DIOPT Version :9

Sequence 1:NP_001287005.1 Gene:phol / 39095 FlyBaseID:FBgn0035997 Length:669 Species:Drosophila melanogaster
Sequence 2:XP_005170286.1 Gene:yy1b / 406394 ZFINID:ZDB-GENE-040426-2127 Length:365 Species:Danio rerio


Alignment Length:526 Identity:158/526 - (30%)
Similarity:212/526 - (40%) Gaps:206/526 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   124 ATADALPPPIIMQQTSDDEEFIEEDGQQMTSSCDGDGDEDDE-----ATAPATTNAFEIASEMLT 183
            |...|:|..::..|.      ||.:..:.|.....|.|||:|     |..|..|...|....:|.
Zfish    11 AEGAAVPAELVELQE------IEVETIETTVIGGEDEDEDEEEPAMIALQPLHTGDGEPGVILLQ 69

  Fly   184 TIEATNIKEEQLESDFYMK--------------------ATEDSNSSNGQLQDFKLFGSSRVERP 228
            |.|....::.:|..|.:.:                    .|....||.|:.......|..:..:.
Zfish    70 TREEVVGEDAELRGDAFEEQILIPVPTPGADAQYIGQTLLTVAGRSSGGRAGRRAAAGGKKTGKK 134

  Fly   229 MGNSAA----KRWKQTKVPIRITQDEFNVTLWSSLNSEDEDEEEELEEPPGCAGTTSVTSSSAAQ 289
            ...|||    ::|:|.:|.|:..:.||:||:|:|      |:::|||..                
Zfish   135 SYLSAAESSGRKWEQKQVQIKTLEGEFSVTMWAS------DDKKELEHE---------------- 177

  Fly   290 NEGSPSMPKLIIDEHMINHDVLSDGIGNEYVILPDPFSASAVTDVEEVVNAFMGDVKGEEDSQPL 354
                       ::||:|.                                               
Zfish   178 -----------VEEHIIG----------------------------------------------- 184

  Fly   355 SEQLIYAENQLEEAYGNIELIENMPNNVELIQTPGPGPATVSVALSKVNGCVPNPQPALPKLVLQ 419
                                 ||.|.:.....|....|.          |.:|....:.||.:.:
Zfish   185 ---------------------ENSPPDYSEYMTGKKLPP----------GGIPGIDLSDPKQLAE 218

  Fly   420 NSS--TNVRLKSAGNQSKVTKRQLTAAAQVATPNPPPPLVASSNPARPQRPTIVTKLPTAVANQT 482
            .:|  :|    |.|..|::..:::                                         
Zfish   219 FASPFSN----SGGQFSRMKPKKI----------------------------------------- 238

  Fly   483 AGNAMGAAGAAGEEDEEPK-FRCTHRGCNKEFRNHSAMRKHMHTHGPRGHVCNVCGKSFVESSKL 546
                        :||:.|: ..|.|:||:|.||::||||||:||||||.|||..|||:|||||||
Zfish   239 ------------KEDDAPRTIACPHKGCSKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKL 291

  Fly   547 KRHQLVHTGEKPFECTFEGCGKRFSLDFNLRTHVRIHTGDRPYHCPIDGCSKCFAQSTNLKSHML 611
            |||||||||||||:|||||||||||||||||||||||||||||.||.|||:|.||||||||||:|
Zfish   292 KRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHIL 356

  Fly   612 THTKPK 617
            ||.|.|
Zfish   357 THAKAK 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pholNP_001287005.1 zf-C2H2 502..526 CDD:278523 14/23 (61%)
COG5048 <504..614 CDD:227381 92/109 (84%)
C2H2 Zn finger 504..526 CDD:275368 14/21 (67%)
zf-C2H2 531..553 CDD:278523 18/21 (86%)
C2H2 Zn finger 533..553 CDD:275368 16/19 (84%)
zf-H2C2_2 546..571 CDD:290200 23/24 (96%)
C2H2 Zn finger 561..583 CDD:275368 21/21 (100%)
zf-H2C2_2 575..602 CDD:290200 22/26 (85%)
C2H2 Zn finger 591..613 CDD:275368 17/21 (81%)
yy1bXP_005170286.1 COG5048 <208..358 CDD:227381 101/206 (49%)
C2H2 Zn finger 249..271 CDD:275368 14/21 (67%)
zf-C2H2 276..298 CDD:278523 18/21 (86%)
C2H2 Zn finger 278..298 CDD:275368 16/19 (84%)
zf-H2C2_2 291..316 CDD:290200 23/24 (96%)
C2H2 Zn finger 306..328 CDD:275368 21/21 (100%)
zf-H2C2_2 320..347 CDD:290200 22/26 (85%)
C2H2 Zn finger 336..358 CDD:275368 17/21 (81%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 99 1.000 Domainoid score I7028
eggNOG 1 0.900 - - E33208_3BEPX
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 262 1.000 Inparanoid score I3086
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D362296at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR14003
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.970

Return to query results.
Submit another query.