DRSC/TRiP Functional Genomics Resources

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Protein Alignment phol and yy1a

DIOPT Version :9

Sequence 1:NP_001287005.1 Gene:phol / 39095 FlyBaseID:FBgn0035997 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_997782.1 Gene:yy1a / 322397 ZFINID:ZDB-GENE-030131-1117 Length:357 Species:Danio rerio


Alignment Length:514 Identity:155/514 - (30%)
Similarity:209/514 - (40%) Gaps:207/514 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 TSVTVATADALPPPIIMQQ-TSDD-------EEFIEEDGQQMTSSCDGDGDEDDEATAPATTNAF 175
            |:|.....|...|.|.:|. .:||       |..:.:..:::....|.|...||         :|
Zfish    33 TTVVGGDDDEHQPMIALQPLVTDDPNHVNHQEVILVQTREEVVGCDDSDLHADD---------SF 88

  Fly   176 EIASEMLTTIEATNIKEEQLESDFYMKATEDSNSSNGQLQDFKLFGSSRVERPMGNSA---AKRW 237
            |  .::|..:.....:||.:|...   .|....:.:|:::.....|...|::...|||   .::|
Zfish    89 E--DQILIPVPVPVAEEEYIEQTL---VTVSGKNPSGRMKKGGGSGKRVVKKSFLNSAEASGRKW 148

  Fly   238 KQTKVPIRITQDEFNVTLWSSLNSEDEDEEEELEEPPGCAGTTSVTSSSAAQNEGSPSMPKLIID 302
            :|.:|.|:..:.||:||:|:|.:.:|.|.|..:||                |..|..|.|..   
Zfish   149 EQKQVQIKTLEGEFSVTMWASDDKKDVDHETVVEE----------------QIIGENSPPDY--- 194

  Fly   303 EHMINHDVLSDGIGNEYVI---LPDPFSASAVTDVEEVVNAFMGDVKGEEDSQPLSEQLIYAENQ 364
                          :||:.   ||.                  |.:.|.:.|.|           
Zfish   195 --------------SEYMTGKKLPP------------------GGIPGIDLSDP----------- 216

  Fly   365 LEEAYGNIELIENMPNNVELIQTPGPGPATVSVALSKVNGCVPNPQPALPKLVLQNSSTNVRLKS 429
                                                                             
Zfish   217 ----------------------------------------------------------------- 216

  Fly   430 AGNQSKVTKRQLTAAAQVATPNPPPPLVASSNPARPQRPTIVTKLPTAVANQTAGNAMGAAGAAG 494
                     :||...|::                :|::.                          
Zfish   217 ---------KQLAEFARM----------------KPRKI-------------------------- 230

  Fly   495 EEDEEPK-FRCTHRGCNKEFRNHSAMRKHMHTHGPRGHVCNVCGKSFVESSKLKRHQLVHTGEKP 558
            :||:.|: ..|.|:||.|.||::||||||:||||||.|||..|||:|||||||||||||||||||
Zfish   231 KEDDSPRTIACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKP 295

  Fly   559 FECTFEGCGKRFSLDFNLRTHVRIHTGDRPYHCPIDGCSKCFAQSTNLKSHMLTHTKPK 617
            |:|||||||||||||||||||||||||||||.||.|||:|.||||||||||:|||.|.|
Zfish   296 FQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pholNP_001287005.1 zf-C2H2 502..526 CDD:278523 14/23 (61%)
COG5048 <504..614 CDD:227381 92/109 (84%)
C2H2 Zn finger 504..526 CDD:275368 14/21 (67%)
zf-C2H2 531..553 CDD:278523 18/21 (86%)
C2H2 Zn finger 533..553 CDD:275368 16/19 (84%)
zf-H2C2_2 546..571 CDD:290200 23/24 (96%)
C2H2 Zn finger 561..583 CDD:275368 21/21 (100%)
zf-H2C2_2 575..602 CDD:290200 22/26 (85%)
C2H2 Zn finger 591..613 CDD:275368 17/21 (81%)
yy1aNP_997782.1 COG5048 <211..350 CDD:227381 100/265 (38%)
C2H2 Zn finger 241..263 CDD:275368 14/21 (67%)
zf-C2H2 268..290 CDD:278523 18/21 (86%)
C2H2 Zn finger 270..290 CDD:275368 16/19 (84%)
zf-H2C2_2 283..308 CDD:290200 23/24 (96%)
C2H2 Zn finger 298..320 CDD:275368 21/21 (100%)
zf-H2C2_2 312..339 CDD:290200 22/26 (85%)
C2H2 Zn finger 328..350 CDD:275368 17/21 (81%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 99 1.000 Domainoid score I7028
eggNOG 1 0.900 - - E33208_3BEPX
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 262 1.000 Inparanoid score I3086
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D362296at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR14003
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
98.930

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