DRSC/TRiP Functional Genomics Resources

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Protein Alignment phol and Zic4

DIOPT Version :10

Sequence 1:NP_648317.1 Gene:phol / 39095 FlyBaseID:FBgn0035997 Length:669 Species:Drosophila melanogaster
Sequence 2:XP_063121638.1 Gene:Zic4 / 315882 RGDID:1307298 Length:353 Species:Rattus norvegicus


Alignment Length:279 Identity:73/279 - (26%)
Similarity:105/279 - (37%) Gaps:76/279 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   453 PPPLVASSNPARPQRPTIVTKLPTAVA-----------NQTAGNAMGAAGAAGEEDEEPKFRC-- 504
            |..:.|.|.|..|........|.||.|           |.||.:..||......:..:.:..|  
  Rat    75 PGDMYARSEPFAPGPMARGDTLATATALHGYGGMNLTMNLTAPHGPGAFFRYMRQPIKQELICKW 139

  Fly   505 -------THRGCNKEFRNHSAMRKHM---HTHGPR--GHVC------------------------ 533
                   :.|.|:|.|.....:..|:   |..||.  .|:|                        
  Rat   140 LGDDSPISPRPCSKTFSTMHELVTHVTVEHVGGPEQANHICFWEECPRQGKPFKAKYKLVNHIRV 204

  Fly   534 -----------NVCGKSFVESSKLKRHQLVHTGEKPFECTFEGCGKRFSLDFNLRTHVRIHTGDR 587
                       ..|||.|..|..||.|:..|||||||.|.||||.:||:...:.:.|..:||.|:
  Rat   205 HTGEKPFPCPFPGCGKVFARSENLKIHKRTHTGEKPFRCEFEGCERRFANSSDRKKHSHVHTSDK 269

  Fly   588 PYHCPIDGCSKCFAQSTNLKSHMLTHTKPKRKWPRAPQVSNNKTPLVA---RYGRLEFGEDPRLV 649
            ||.|.:.||.||:...::|:.||..|       .|:|..|:.....:.   ....||.|.:|.:.
  Rat   270 PYMCKVRGCDKCYTHPSSLRKHMKVH-------GRSPPPSSGYDSAITSALTSTSLESGREPSVA 327

  Fly   650 YVEQNEEVASVLLDGTSLT 668
            .      .|:|::.||.::
  Rat   328 C------SAAVVVRGTDVS 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pholNP_648317.1 COG5048 <504..614 CDD:227381 47/158 (30%)
C2H2 Zn finger 504..526 CDD:275368 7/33 (21%)
C2H2 Zn finger 533..553 CDD:275368 9/54 (17%)
C2H2 Zn finger 561..583 CDD:275368 8/21 (38%)
C2H2 Zn finger 591..613 CDD:275368 8/21 (38%)
Zic4XP_063121638.1 None

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